Entry information : PtaPrx34(PTA00076271)
Entry ID 15175
Creation 2018-04-25 (Christophe Dunand)
Last sequence changes 2018-04-25 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-02 (Christophe Dunand)
Peroxidase information: PtaPrx34(PTA00076271)
Name PtaPrx34(PTA00076271)
Class Class III peroxidase    [Orthogroup: Prx211]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx34
start..stop
S start..stop
PabPrx82 554 0 1..316 1..316
PabPrx20 551 0 1..316 13..328
PtaPrx70 535 0 1..316 1..316
PabPrx140 521 0 1..316 12..327
Literature and cross-references PtaPrx34(PTA00076271)
EST ref. GenBank:   DR688340.1 [5' end]   CO172584.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.18384
Protein sequence: PtaPrx34(PTA00076271)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316 (294)
PWM (Da):   %s   33525.62 (31095.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.26 (6.88) Peptide Signal:   %s   cut: 23 range:23-316
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAIRSVVCIS LLILLCSPAI YGQLSSGFYN QSCPNVLSIV NSVVQQAIAQ EKRMGASLLR LHFHDCFVNG CDGSVLLDDN STFTGEKTAK PNNNSLRGFD AVDTIKSQLE AACSGVVSCA  DIVAIAARDS VVQLGGPSWT VLLGRRDSTT ASLSAANNLI PPPTSNLSAL ISSFGAVGLS PDDMVALAGS HTIGQARCTT FRNRIYNESS KDSTFASLTQ ANCPATGGDN NLASLDLLTP 
TVFDNNYYNN LKSQKGLLHS DQLLFNGSST DTKVSFYATY PNAFFSDFAG AMVKMGNINP LTGNNGEIRK NCRKTN* 

Retrieve as FASTA  
Remarks Compete sequence from genomic incorrect prediction, exons 1 and 2 are missing due to scaffold border) and ESTs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGCAGTGGTG TCGTGTCGTG TGCTGATATT GTCGCCATTG CTGCTCGTGA TTCAGTCGTG CAAGTATAAA TTCATCTCGA CACTTCTGAA TTTATTGAAC TTTTTGTCAA TACAATATCT  CATGGAATTG GAGCAATTAA ATAACGTTGT TGGTTCATCT GTATTTGATA GCTGGGAGGC CCATCATGGA CGGTATTGCT AGGGAGGCGA GACTCGACGA CTGCTAGTTT AAGTGCTGCA  AACAATCTCA TTCCCCCTCC CACCTCCAAC CTCAGCGCCC TCATCTCATC ATTTGGAGCA GTGGGACTTT CTCCGGATGA CATGGTCGCA CTTGCAGGTA CTCAGGATTA AACTGTGTTG  GATTTGGAAG CCTTTCTTGG GTTTGTTACA TGATTGATTT AAGGATCAGT TAATTCTAGT ATTTGTTTAT TAATACTGGA TTAGATTAAA TTGGGGTGGA CTTTTGTAAT TTTTTCTGAG  TGGTTTTTCA CATGTGATTG AGTCGAGTTT AGAGGGAAGT ATATCCCCTG AAGAAGCAAC ATATTACATA TATATATATA GGTGAAGCAA GCAAATAGAA TAGTGGAAGC TGTGGATATT  TACAACATAT ACATCAATCA CAACCATCAC ATCAAATCGG TATGCAATCA CTATGATACA ACATAAGCTG CAACCCAGCA CCACTATGGA GAATCGAACA CGGTTGTGGT GCAAGAAAGC  CGACTGCCCT GACCGTAGTA CCATGCACAC ATGCCCCGAG GATACCTTAA TTTTAGCAAT GCATCTATTT ACTAACATCT CACTTGTAGC GATGCATCTA TTTACTAATA CCTCACTTGT  TGGTTTTGTT GTAATCCTGA TCCCAATATG TGCTTGTAAT CCTGATCCCA ACATAAGTTT TGTTGTAATC TTTTTGTTGT AATCCTGATC CCAACATGTG CTTGTTTAGG GTTTAAACTC  TGTAATGCAT CAATTTACTA ACACTTATAG ATTTTGGTAT AATGACAATA GTTAAAAATC CTCTGCATTT GTAACCATTA GTCATCTATA TTGATTGTAA ATTTTAAAAT TCAAAACAAA  TTTTGAAAAT ATTTAAATTC AAAAATAAAT AACAACAAAA TTAATTGCTT AAACTCATTA CTATCAATTT ATTCATTATT CTCAGAATCT ACAATCCAGA TAATTTCAAA TATAACAATT  AATCATGATA TTCCATAATG ACGTATTAAA CTCCTCCTGG TTTGCAGGTT CTCATACAAT TGGCCAAGCG CGTTGCACAA CCTTCAGAAA TCGCATCTAT AATGAATCCA GCAAAGACTC  GACATTCGCC AGCTTAACCC AGGCAAACTG CCCAGCTACA GGAGGTGACA ATAACCTAGC ATCCTTGGAC CTCCTCACTC CCACAGTCTT TGACAATAAC TATTATAACA ATCTGAAGAG  CCAGAAGGGA CTCCTCCACT CTGACCAGCT ATTATTCAAT GGGAGTTCTA CTGATACTAA GGTTTCTTTC TACGCCACCT ATCCAAATGC CTTCTTCAGT GATTTTGCAG GTGCCATGGT 
GAAGATGGGG AACATCAATC CTCTCACCGG GAACAATGGA GAGATCCGAA AAAATTGCAG GAAAACCAAC TGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAATCA GAAGCGTTGT ATGTATTAGT TTGCTAATTC TTCTATGTTC CCCAGCCATT TATGGGCAAC TTTCCTCAGG TTTTTATAAC CAATCGTGCC CCAATGTGTT GTCCATAGTG  AATTCTGTAG TTCAGCAGGC CATTGCCCAG GAGAAACGGA TGGGGGCGTC GTTGCTGCGC CTTCACTTTC ACGACTGTTT CGTTAATGGT TGCGATGGCT CAGTACTGTT GGACGACAAC  TCGACATTTA CAGGCGAGAA GACCGCAAAA CCTAATAACA ATTCCTTGAG AGGATTTGAT GCTGTAGACA CCATCAAATC TCAACTGGAG GCAGCCTGCA GTGGTGTCGT GTCGTGTGCT  GATATTGTCG CCATTGCTGC TCGTGATTCA GTCGTGCAAC TGGGAGGCCC ATCATGGACG GTATTGCTAG GGAGGCGAGA CTCGACGACT GCTAGTTTAA GTGCTGCAAA CAATCTCATT  CCCCCTCCCA CCTCCAACCT CAGCGCCCTC ATCTCATCAT TTGGAGCAGT GGGACTTTCT CCGGATGACA TGGTCGCACT TGCAGGTTCT CATACAATTG GCCAAGCGCG TTGCACAACC  TTCAGAAATC GCATCTATAA TGAATCCAGC AAAGACTCGA CATTCGCCAG CTTAACCCAG GCAAACTGCC CAGCTACAGG AGGTGACAAT AACCTAGCAT CCTTGGACCT CCTCACTCCC  ACAGTCTTTG ACAATAACTA TTATAACAAT CTGAAGAGCC AGAAGGGACT CCTCCACTCT GACCAGCTAT TATTCAATGG GAGTTCTACT GATACTAAGG TTTCTTTCTA CGCCACCTAT 
CCAAATGCCT TCTTCAGTGA TTTTGCAGGT GCCATGGTGA AGATGGGGAA CATCAATCCT CTCACCGGGA ACAATGGAGA GATCCGAAAA AATTGCAGGA AAACCAACTG A 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGTATGCAAT ATTATTATTT CATTTAGCAC AATGGCAATC AGAAGCGTTG TATGTATTAG TTTGCTAATT CTTCTATGTT CCCCAGCCAT TTATGGGCAA CTTTCCTCAG GTTTTTATAA  CCAATCGTGC CCCAATGTGT TGTCCATAGT GAATTCTGTA GTTCAGCAGG CCATTGCCCA GGAGAAACGG ATGGGGGCGT CGTTGCTGCG CCTTCACTTT CACGACTGTT TCGTTAATGG  TTGCGATGGC TCAGTACTGT TGGACGACAA CTCGACATTT ACAGGCGAGA AGACCGCAAA ACCTAATAAC AATTCCTTGA GAGGATTTGA TGCTGTAGAC ACCATCAAAT CTCAACTGGA  GGCAGCCTGC AGTGGTGTCG TGTCGTGTGC TGATATTGTC GCCATTGCTG CTCGTGATTC AGTCGTGCAA CTGGGAGGCC CATCATGGAC GGTATTGCTA GGGAGGCGAG ACTCGACGAC  TGCTAGTTTA AGTGCTGCAA ACAATCTCAT TCCCCCTCCC ACCTCCAACC TCAGCGCCCT CATCTCATCA TTTGGAGCAG TGGGACTTTC TCCGGATGAC ATGGTCGCAC TTGCAGGTTC  TCATACAATT GGCCAAGCGC GTTGCACAAC CTTCAGAAAT CGCATCTATA ATGAATCCAG CAAAGACTCG ACATTCGCCA GCTTAACCCA GGCAAACTGC CCAGCTACAG GAGGTGACAA  TAACCTAGCA TCCTTGGACC TCCTCACTCC CACAGTCTTT GACAATAACT ATTATAACAA TCTGAAGAGC CAGAAGGGAC TCCTCCACTC TGACCAGCTA TTATTCAATG GGAGTTCTAC  TGATACTAAG GTTTCTTTCT ACGCCACCTA TCCAAATGCC TTCTTCAGTG ATTTTGCAGG TGCCATGGTG AAGATGGGGA ACATCAATCC TCTCACCGGG AACAATGGAG AGATCCGAAA  AAATTGCAGG AAAACCAACT GATGCCTGGA GCTCCTCCTC TCAGAATTGC CATGATTTTT TTTTTAAGAG ATAGATTCAT TTCCTGCGAA ATCACCTCCA TCGTAAAAGC TATATTTAGT 
TTTCTAGCCT AAAGGTCTCA TGTATTTGGA TTGAGAATCT GTATTCAATA ACAAATTGCA GAAATAAACC TGAAGTGGCT G 

Retrieve as FASTA