Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
358 (201) |
| PWM (Da): |
39561.72 (21732.1) |
Transmb domain: |
i47-69o |
| PI (pH): |
9.24 (8.73) |
Peptide Signal: |
cut: 29 range:29-229 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSAATVSRQF ARAALRTSAR QTFATSSRQA FRQGGRRFYS SEQPKKSSVG PLVYVAGAAV AAGAGYYLFS QGSGSASTKV FTPTGEDYQK VYNEVAARLE EKDDYDDGSY GPVLVRLAWH
ASGTYDKETG TGGSDGATMR FAPEGDHGAN AGLKHARDFL EPVKAKFPWI TYSDLWILAG VCAIQEMQGP TVPYRPGRSD KDAAACTPDG RLPDAAQGTN HLRNIFYRMG FNDQEIVALS
GAHALGRCHT DRSGFEGPWT FSPTVLTNDY YTLLLDEKWH IRKWRGPQQY QDKTKGLMML PADYALIGDK AMRPWVEKYA KDNDLFFKDF SAVVTKLFEL GVRFKPDTKT IIFKPTNA*
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Retrieve as FASTA
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| Remarks |
fgenesh1_kg.22_#_79_#_Locus1345v1rpkm105.65 Xylhyp1 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTGCTG CTACTGTTTC CCGTCAGTTC GCCCGCGCGG CTCTGCGCAC CTCTGCCCGC CAGACTTTCG CCACATCGTC TCGCCAGGCT TTCCGCCAGG GTGGTCGCCG GTTCTATTCG
TCAGAGCAGC CTAAGAAGTC CAGCGTCGGT CCCCTCGTCT ATGTCGCGGG TGCTGCTGTT GCCGCAGGCG CTGGCTACTA CCTATTCAGC CAAGGCTCAG GTTCCGCCTC TACCAAGGTC
TTCACGCCTA CCGGGGAGGA CTACCAGAAG GTCTACAACG AGGTTGCCGC TCGACTCGAG GAAAAGGACG ACTACGACGA TGGCAGCTAC GGCCCTGTCT TGGTCCGCCT TGCCTGGCAC
GCTAGCGGAA CCTATGATAA GGAGACCGGT ACTGGTGGCA GCGACGGCGC CACCATGCGG TTTGCCCCCG AGGGTGATCA CGGTGCCAAC GCTGGCCTCA AGCATGCTCG TGATTTCCTC
GAGCCTGTAA AGGGTAAGTT CTCGCTCCGA AACATTATTC GTCAACGCAG CAACTAATAT CGACCTCGCG CAGCCAAGTT CCCTTGGATC ACTTATTCGG ATCTGTGGAT TCTAGCTGGT
GTATGCGCGA TCCAAGAAAT GCAGGGGCCC ACGGTCCCCT ACCGACCTGG TCGTAGTGAC AAGGACGCCG CCGCCTGCAC CCCGGATGGG CGTCTTCCCG ACGCTGCCCA GGGCACAAAC
CACCTGCGAA ACATCTTCTA CCGCATGGGA TTCAATGACC AGGAGATCGT CGCTCTTTCT GGTGCCCATG CGCTTGGCCG CTGCCATACC GACCGCAGCG GTTTCGAAGG CCCCTGGACC
TTCTCTCCTA CTGTCTTGAC CAACGACTAC TACACCCTAC TTCTAGACGA GAAGTGGCAC ATCCGGAAGT GGCGCGGCCC CCAGCAGTAT CAGGACAAGA CCAAGGGCTT GATGATGTTG
CCCGCCGACT ATGCCCTAAT CGGCGACAAG GCTATGAGGC CATGGGTTGA GAAGTACGCC AAGGATAACG ATCTCTTCTT CAAAGACTTC TCTGCTGTCG TCACCAAGCT TTTCGAACTC
GGCGTGCGCT TCAAGCCTGA TACTAAGACC ATTATCTTCA AGCCTACCAA TGCTTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTGCTG CTACTGTTTC CCGTCAGTTC GCCCGCGCGG CTCTGCGCAC CTCTGCCCGC CAGACTTTCG CCACATCGTC TCGCCAGGCT TTCCGCCAGG GTGGTCGCCG GTTCTATTCG
TCAGAGCAGC CTAAGAAGTC CAGCGTCGGT CCCCTCGTCT ATGTCGCGGG TGCTGCTGTT GCCGCAGGCG CTGGCTACTA CCTATTCAGC CAAGGCTCAG GTTCCGCCTC TACCAAGGTC
TTCACGCCTA CCGGGGAGGA CTACCAGAAG GTCTACAACG AGGTTGCCGC TCGACTCGAG GAAAAGGACG ACTACGACGA TGGCAGCTAC GGCCCTGTCT TGGTCCGCCT TGCCTGGCAC
GCTAGCGGAA CCTATGATAA GGAGACCGGT ACTGGTGGCA GCGACGGCGC CACCATGCGG TTTGCCCCCG AGGGTGATCA CGGTGCCAAC GCTGGCCTCA AGCATGCTCG TGATTTCCTC
GAGCCTGTAA AGGCCAAGTT CCCTTGGATC ACTTATTCGG ATCTGTGGAT TCTAGCTGGT GTATGCGCGA TCCAAGAAAT GCAGGGGCCC ACGGTCCCCT ACCGACCTGG TCGTAGTGAC
AAGGACGCCG CCGCCTGCAC CCCGGATGGG CGTCTTCCCG ACGCTGCCCA GGGCACAAAC CACCTGCGAA ACATCTTCTA CCGCATGGGA TTCAATGACC AGGAGATCGT CGCTCTTTCT
GGTGCCCATG CGCTTGGCCG CTGCCATACC GACCGCAGCG GTTTCGAAGG CCCCTGGACC TTCTCTCCTA CTGTCTTGAC CAACGACTAC TACACCCTAC TTCTAGACGA GAAGTGGCAC
ATCCGGAAGT GGCGCGGCCC CCAGCAGTAT CAGGACAAGA CCAAGGGCTT GATGATGTTG CCCGCCGACT ATGCCCTAAT CGGCGACAAG GCTATGAGGC CATGGGTTGA GAAGTACGCC
AAGGATAACG ATCTCTTCTT CAAAGACTTC TCTGCTGTCG TCACCAAGCT TTTCGAACTC GGCGTGCGCT TCAAGCCTGA TACTAAGACC ATTATCTTCA AGCCTACCAA TGCTTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCCAGCGCGG CTTCAAGGTG CGGACGGTGC GGCTTTCAGG GTCCACCCCA AATCTCTGAG CAAAGACCGT CGGGTTGCCG CTAAGCCAAT CAGTGTTTCG GGATTGATAA AGCTCCCGTT
CGTCATTTAT CGACTAAATG TCTGCTGCTA CTGTTTCCCG TCAGTTCGCC CGCGCGGCTC TGCGCACCTC TGCCCGCCAG ACTTTCGCCA CATCGTCTCG CCAGGCTTTC CGCCAGGGTG
GTCGCCGGTT CTATTCGTCA GAGCAGCCTA AGAAGTCCAG CGTCGGTCCC CTCGTCTATG TCGCGGGTGC TGCTGTTGCC GCAGGCGCTG GCTACTACCT ATTCAGCCAA GGCTCAGGTT
CCGCCTCTAC CAAGGTCTTC ACGCCTACCG GGGAGGACTA CCAGAAGGTC TACAACGAGG TTGCCGCTCG ACTCGAGGAA AAGGACGACT ACGACGATGG CAGCTACGGC CCTGTCTTGG
TCCGCCTTGC CTGGCACGCT AGCGGAACCT ATGATAAGGA GACCGGTACT GGTGGCAGCG ACGGCGCCAC CATGCGGTTT GCCCCCGAGG GTGATCACGG TGCCAACGCT GGCCTCAAGC
ATGCTCGTGA TTTCCTCGAG CCTGTAAAGG CCAAGTTCCC TTGGATCACT TATTCGGATC TGTGGATTCT AGCTGGTGTA TGCGCGATCC AAGAAATGCA GGGGCCCACG GTCCCCTACC
GACCTGGTCG TAGTGACAAG GACGCCGCCG CCTGCACCCC GGATGGGCGT CTTCCCGACG CTGCCCAGGG CACAAACCAC CTGCGAAACA TCTTCTACCG CATGGGATTC AATGACCAGG
AGATCGTCGC TCTTTCTGGT GCCCATGCGC TTGGCCGCTG CCATACCGAC CGCAGCGGTT TCGAAGGCCC CTGGACCTTC TCTCCTACTG TCTTGACCAA CGACTACTAC ACCCTACTTC
TAGACGAGAA GTGGCACATC CGGAAGTGGC GCGGCCCCCA GCAGTATCAG GACAAGACCA AGGGCTTGAT GATGTTGCCC GCCGACTATG CCCTAATCGG CGACAAGGCT ATGAGGCCAT
GGGTTGAGAA GTACGCCAAG GATAACGATC TCTTCTTCAA AGACTTCTCT GCTGTCGTCA CCAAGCTTTT CGAACTCGGC GTGCGCTTCA AGCCTGATAC TAAGACCATT ATCTTCAAGC
CTACCAATGC TTAAGCCTAC TCCCATATCC ACAACCACAA CAATGAGCGA GTGTTTAAAT GATACCATAT TACAAAAGGA ACGGGATGGG GAACCAAGAT TAGATGGAAT TTAGACTTAG
ATCCAGACAC AGAAGTGTGA CTAAGCTTGC GCCTTGGGTT GGCGACAAAC CAAAACCCCC GAGGCAAGAG GAAAAGCTGC CTCATAGCTT GTGTCGTGTT CATTAGATAT CGATCTTTGC
GAGCGAGCAC CTTGCATGTT GTCTTTATCT CATTCTGTAA ATCGAATGTA TATAATGATG AGGAATTCAG AAAACAGTTA ACAGCA
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Retrieve as FASTA
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