Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
378 (359) |
| PWM (Da): |
39529.49 (37552.4) |
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| PI (pH): |
4.19 (4.15) |
Peptide Signal: |
cut: 20 range:20-378 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFKSLAVFA ALAASLVQAA PPRLATCPDG NKVSNSACCA FFALRDDLQA NLFDNQCGED THEVVRLTFH DAIAFSESLK AQGKPAGGGA DGSMLVFPNV EPNFAANLGI SDSVDALLPF
LATHNSITAG DLIQFAGAVG LTNCPGAPQL EFLAGRPNAT APAPDGLIPE PQDSVDSIIS RFADGGGFTP DEIVALLASH TIARADHVDP TLDAAPFDST PFTFDTQVFL EVLLKGVGFP
GLDNNTGEVS SPLPIGEGDN VGELRLQSDF RLARDPRTAC TWQGFVNEQE KMSSAFKAAM AKLAVNGQDT RDFIDCSEVV PPPTPAVNKP ATFPATKTRQ DLQQACLVSP FPSLPTDAGA
QETLIPHCPD GLNATCTS*
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Retrieve as FASTA
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| Remarks |
fgenesh2_kg.184_#_31_#_Locus5671v1rpkm36.88 Ramac1 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTTCA AGTCTCTTGC CGTCTTCGCC GCGCTCGCTG CATCCCTCGT TCAAGCCGCC CCACCAAGGC TTGCAACTTG TCCAGATGGA AACAAGGTCT CCAACTCTGC TTGCTGCGCA
TTCTTTGCGC TCCGAGATGA CCTCCAAGCG AACCTGTGAG ACTGATACAT GTCGTTCAAT CCCTCATCTC ATGGCTAACC GTCTGTCACT TATTAGTTTC GATAACCAGT GTGGTGAGGA
CACTCACGAA GTCGTCCGTC TCACATTCCG TGAGTGAATC CAATGCGCGA TAGTTTAGTT CACTGTCTAA TAATCCCCTG CAGATGATGC CATCGCATTC TCGGAGTCGT TGAAAGCTCA
GGGAAAACCC GCTGGTGGAG GAGCTGACGG GTCCATGCTC GTCTTCCCAA ACGTCGAGCC CAACTTCGCC GCCAACCTCG GTATCAGTGA CAGTGTGGAC GCGCTCTTGC CCTTCCTCGC
TACCCACAAC TCCATCACAG CTGGAGATCT CATCCAGTTC GCTGGCGCCG TCGGGCTCAC CAACTGCCCC GGTGCTCCGC AACTCGAGTT TTTGGCTGGT CGCCCGAATG CTACGGCCCC
GGCTCCTGAC GGGCTTATCC CTGAGCCACA GGACTCCGTC GATTCGATCA TCTCTCGCTT TGCTGACGGC GGAGGATTCA CTCCCGATGA AATCGTTGCC TTGTTGGCGT CCCACACGAT
TGCTCGCGCC GACCACGTCG ACCCTACACT TGATGCCGCG CCTTTCGACT CAACCCCTTT CACTTTCGAT ACTCAGGTCT TCCTCGAGGT GTTGCTTAAG GGTGTTGGCT TCCCCGGACT
TGACAACAAC ACTGGTGGGA TTTTAATATC TATACTTTTC ATAATTTCTG ACTTTAACCC CACTCTCCAG GTGAAGTCTC GTCTCCCCTG CCAATAGGTG AAGGAGACAA TGTGGGAGAG
CTCCGTCTCC AGTCCGACTT TAGACTCGCT CGCGACCCCC GCACGTAAGT TGCTAAACAT TCTTCACGCA TAGTCATACA TTCTGACGCG GTTTAATGCT TTAGTGCATG CACATGGCAA
GGATTTGTGA ATGAGCAGGA GAAGATGTCC AGCGCATTCA AAGCTGCCAT GGCGAAGCTC GCTGTGAACG GACAGGACAC CCGTGACTTT ATTGACTGCT CCGAGGTCGT CCCTCCTCCA
ACCCCTGCCG TCAATAAGCC TGCGACGTAT GTTTTTGAAA CTGTTTCTAG ATGATAAATT TATTCACAAG CTTTGTAGTT TCCCTGCCAC CAAAACCAGG CAAGATCTTC AACAAGCTTG
CTTGGTCTCT CCATTCCCCA GCCTCCCCAC TGACGCAGGC GCACAAGAGA CTCTCATCCC GTGAGTGCAA CTTGTATTTT CTCGGCACAT ACTGACTGCA TTGCTTCATC CCCAGCCATT
GCCCCGACGG CCTTAACGCC ACCTGCACTT CCTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTTCA AGTCTCTTGC CGTCTTCGCC GCGCTCGCTG CATCCCTCGT TCAAGCCGCC CCACCAAGGC TTGCAACTTG TCCAGATGGA AACAAGGTCT CCAACTCTGC TTGCTGCGCA
TTCTTTGCGC TCCGAGATGA CCTCCAAGCG AACCTTTTCG ATAACCAGTG TGGTGAGGAC ACTCACGAAG TCGTCCGTCT CACATTCCAT GATGCCATCG CATTCTCGGA GTCGTTGAAA
GCTCAGGGAA AACCCGCTGG TGGAGGAGCT GACGGGTCCA TGCTCGTCTT CCCAAACGTC GAGCCCAACT TCGCCGCCAA CCTCGGTATC AGTGACAGTG TGGACGCGCT CTTGCCCTTC
CTCGCTACCC ACAACTCCAT CACAGCTGGA GATCTCATCC AGTTCGCTGG CGCCGTCGGG CTCACCAACT GCCCCGGTGC TCCGCAACTC GAGTTTTTGG CTGGTCGCCC GAATGCTACG
GCCCCGGCTC CTGACGGGCT TATCCCTGAG CCACAGGACT CCGTCGATTC GATCATCTCT CGCTTTGCTG ACGGCGGAGG ATTCACTCCC GATGAAATCG TTGCCTTGTT GGCGTCCCAC
ACGATTGCTC GCGCCGACCA CGTCGACCCT ACACTTGATG CCGCGCCTTT CGACTCAACC CCTTTCACTT TCGATACTCA GGTCTTCCTC GAGGTGTTGC TTAAGGGTGT TGGCTTCCCC
GGACTTGACA ACAACACTGG TGAAGTCTCG TCTCCCCTGC CAATAGGTGA AGGAGACAAT GTGGGAGAGC TCCGTCTCCA GTCCGACTTT AGACTCGCTC GCGACCCCCG CACTGCATGC
ACATGGCAAG GATTTGTGAA TGAGCAGGAG AAGATGTCCA GCGCATTCAA AGCTGCCATG GCGAAGCTCG CTGTGAACGG ACAGGACACC CGTGACTTTA TTGACTGCTC CGAGGTCGTC
CCTCCTCCAA CCCCTGCCGT CAATAAGCCT GCGACTTTCC CTGCCACCAA AACCAGGCAA GATCTTCAAC AAGCTTGCTT GGTCTCTCCA TTCCCCAGCC TCCCCACTGA CGCAGGCGCA
CAAGAGACTC TCATCCCCCA TTGCCCCGAC GGCCTTAACG CCACCTGCAC TTCCTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAGACGCGAT GCTGATCCAA AGGACTGAGT CCTAGAGTCC CAGCTGTTTG CAGAAAATGT ATAAGAGCGA GGAGGCAGTG GCCACATCAC TCCAGCATCC TTCGAGTTGC CTAGGTCACA
GAGTTCAAAG TTTTCAATGG CTTTCAAGTC TCTTGCCGTC TTCGCCGCGC TCGCTGCATC CCTCGTTCAA GCCGCCCCAC CAAGGCTTGC AACTTGTCCA GATGGAAACA AGGTCTCCAA
CTCTGCTTGC TGCGCATTCT TTGCGCTCCG AGATGACCTC CAAGCGAACC TTTTCGATAA CCAGTGTGGT GAGGACACTC ACGAAGTCGT CCGTCTCACA TTCCATGATG CCATCGCATT
CTCGGAGTCG TTGAAAGCTC AGGGAAAACC CGCTGGTGGA GGAGCTGACG GGTCCATGCT CGTCTTCCCA AACGTCGAGC CCAACTTCGC CGCCAACCTC GGTATCAGTG ACAGTGTGGA
CGCGCTCTTG CCCTTCCTCG CTACCCACAA CTCCATCACA GCTGGAGATC TCATCCAGTT CGCTGGCGCC GTCGGGCTCA CCAACTGCCC CGGTGCTCCG CAACTCGAGT TTTTGGCTGG
TCGCCCGAAT GCTACGGCCC CGGCTCCTGA CGGGCTTATC CCTGAGCCAC AGGACTCCGT CGATTCGATC ATCTCTCGCT TTGCTGACGG CGGAGGATTC ACTCCCGATG AAATCGTTGC
CTTGTTGGCG TCCCACACGA TTGCTCGCGC CGACCACGTC GACCCTACAC TTGATGCCGC GCCTTTCGAC TCAACCCCTT TCACTTTCGA TACTCAGGTC TTCCTCGAGG TGTTGCTTAA
GGGTGTTGGC TTCCCCGGAC TTGACAACAA CACTGGTGAA GTCTCGTCTC CCCTGCCAAT AGGTGAAGGA GACAATGTGG GAGAGCTCCG TCTCCAGTCC GACTTTAGAC TCGCTCGCGA
CCCCCGCACT GCATGCACAT GGCAAGGATT TGTGAATGAG CAGGAGAAGA TGTCCAGCGC ATTCAAAGCT GCCATGGCGA AGCTCGCTGT GAACGGACAG GACACCCGTG ACTTTATTGA
CTGCTCCGAG GTCGTCCCTC CTCCAACCCC TGCCGTCAAT AAGCCTGCGA CTTTCCCTGC CACCAAAACC AGGCAAGATC TTCAACAAGC TTGCTTGGTC TCTCCATTCC CCAGCCTCCC
CACTGACGCA GGCGCACAAG AGACTCTCAT CCCCCATTGC CCCGACGGCC TTAACGCCAC CTGCACTTCC TAAGCGTATT GATGACAACT CCTCGCTCAT TCTTATATAT GTATCTGGCT
TAGACGCGGA ATTCTCTTTC GTTTGGTTAT TGCAGACCGT ATTTGTAACG TGAAACTTCA AGAAATTCAA AC
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Retrieve as FASTA
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