Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
405 (382) |
| PWM (Da): |
41555.84 (39038.5) |
Transmb domain: |
i184-206o226-248i268-290o328-350i357-379o389-406i |
| PI (pH): |
4.04 (3.97) |
Peptide Signal: |
cut: 24 range:24-405 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKGRELVILW ALVGTLFFGS LDAQLQAGFY AASCPNADSI VSATVIAGMQ ASQIVGPSVL RLFAHDCFVN GCDASIMLVD PVGNVEKNAG DNQSLQQLAF DTINQAKLAL EQACPGIVSC
ADIIAMAAEV VVNQMGGPSW TVLQGRLDGF TSQATGVAGH LPGAHMDLPA LQAVFGNIGL GVQDIVVLSG AHSVGFSHCV EFTDRLYSFN GVPGATDPSL SAGYATTLQG ICPNGNFNPT
TLQPLDPVTA AQFDNVYFQR LQIGQGLLFS DQILFVDNTT TGLVTTYANN EAQFFNDFVN SMIAMGNAGV LTGTQGEVRL NCSVVNTVSS PPAPVVPPPT TTPTPVPVPP TNPTPAAPGP
AAPVPPTVDL TPPAPVVIPT PTVPTGPTVA PQPFVSSPPP PAGTS
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic (3 introns, contig_8103:19943-22337) and RNA seq (isotig26382). |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAAGGCC GGGAACTCGT AATTTTGTGG GCGCTGGTGG GAACTCTGTT TTTTGGATCG CTGGATGCCC AACTGCAAGC CGGATTCTAT GCAGCGAGCT GCCCCAATGC GGACAGCATA
GTGTCGGCCA CAGTGATTGC CGGGATGCAG GCTTCGCAGA TCGTGGGACC CAGTGTGCTG CGCCTCTTCG CCCATGACTG TTTCGTCAAT GTAAGTCCAT GTTCCTTACC CGTACTCAAC
AAAATTTTGC AATAATCTGC ACCCGTCGTC GTCGTCGTCC ATCGCACCGG GTGGACTGGA CCATCGTCAC ACCGCAAGCA GATGCAAGGG GACTGGTCAT GGGAACAGAA ATGTAACGTG
TTCTAGGGTC CGAGGTCGTT TTGCCACCTC TGGAGATTGT GTGACAGTAA ATTCATGCTG TGGTTACCTT CCTTCGAGGA GTGGATGATG ATCAGCCATG GCTTCAACTC CTGGAGAAGA
TGTATGTACG TTTACAGGCA ATGCTTTGGT TGACAATTTG CATACCCTGG GACAGTCGAT CAGTGGTTGT ACATCTTTGA AGAATGGATG ATCGGCCATG GCTTCAACTC CAGGAGAAGG
TGTATGGTGA GATTGTGCTA AGGTGAAATT CCGATCCGAC TGCAGTTGTG TCTCAAGTCC CCCGCGGTCT GTGCCTTGCG GTTTGCTCAC CAGCCCACCA TCATGTGTTG CAGGGTTGCG
ACGCCTCGAT TATGCTGGTG GATCCGGTCG GAAATGTGGA GAAAAATGCC GGGGATAATC AATCCTTGCA ACAACTAGCA TTCGACACGA TCAACCAAGC TAAGCTAGCT CTCGAGCAAG
CCTGTCCTGG GATCGTCTCC TGTGCGGACA TCATAGCTAT GGCCGCCGAG GTCGTTGTAA ATCAGGTGAG ACAACAACGC CCTGAGTTCA GGTTTATGGA CTGTGAATCT GCACGCAGTG
GTCGAGAGGA TTCGAATTCA AGAATTGACT AATCTTCCCA CTGAAATGCG TATTCGACTA TCCGGTTTGA ATTCAGCTTA GCGAAACATT CCGAGGTCAG ACCCTCCTCC CCTCGCTTCC
ACGTGCCTTT CGGACTCACT GAGCTTCGTC TACTGGGGCA GATGGGAGGA CCATCGTGGA CCGTACTTCA GGGAAGGCTG GACGGGTTTA CCTCTCAAGC AACCGGCGTC GCAGGGCACT
TGCCAGGTGC ACATATGGAC CTGCCCGCCC TGCAGGCAGT TTTCGGGAAC ATCGGTCTGG GAGTGCAAGA CATTGTAGTC CTATCAGGTA CATTCATAAC ATGTGCTGCT GTGCGGCACG
TACTCTGACC TTCCTGGAGA GAATTTTTTG TTGGCATCCT GATAGCAATG GTTTGTCTCT CTGGATTCTG GCCAGTAAGC AAGTCAAATC GAGTCAGTTA TAATACCAGT GACCTCCATG
CGACACCGAT TGCCTTCCTC GTGGCGGAGT CTTGCCTGTC TCCAGCTGGC TGATAGGACA TGGCTTCTCT TCTTGACTAA TTGGCTTGAT TGAGCTTCTT GATGCAATTT TAGCCTAGTG
CTGGCAATTG ATTGCAACTT AGTGGAGGGA GAGGAGGGGG AACAAGGGCG ACCGGATTCG ACCCTGAGGA TCTTGTCAAG TCCAGGTTGT TGCCCTTTAG ATGAGTCCGG TGTCCGTCCG
AAAGAGTGAA AGTGAGCTCG CAATCGAAGG AAGGGGAACA CTAATCCAGG ATTGGAAATT TGCAGGAGCC CATTCGGTTG GCTTTTCTCA CTGCGTCGAG TTCACCGACA GGCTGTACTC
GTTCAATGGA GTGCCCGGCG CAACGGATCC GAGTCTGAGC GCAGGATATG CGACAACGCT GCAAGGAATA TGTCCGAACG GAAACTTCAA TCCGACTACG TTGCAGCCTC TGGACCCAGT
CACGGCGGCC CAGTTCGACA ATGTGTACTT TCAGCGATTG CAAATTGGGC AGGGCCTACT ATTCTCGGAT CAGATCCTCT TTGTGGACAA CACCACAACT GGCCTGGTTA CGACGTACGC
CAACAACGAA GCGCAGTTCT TCAATGATTT CGTGAATTCA ATGATTGCCA TGGGCAACGC TGGCGTTTTA ACCGGCACCC AGGGCGAAGT CAGGCTAAAT TGCTCCGTGG TGAACACCGT
AAGCAGTCCC CCTGCCCCCG TGGTTCCTCC GCCCACAACC ACACCCACGC CAGTCCCCGT TCCACCTACG AATCCCACTC CCGCAGCTCC GGGTCCAGCT GCCCCAGTGC CGCCCACGGT
AGATTTGACT CCTCCAGCAC CCGTGGTGAT TCCCACACCC ACCGTGCCAA CGGGGCCAAC CGTAGCGCCG CAGCCCTTCG TTTCTTCACC TCCGCCTCCA GCAGGCACGT CCTGA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAAGGCC GGGAACTCGT AATTTTGTGG GCGCTGGTGG GAACTCTGTT TTTTGGATCG CTGGATGCCC AACTGCAAGC CGGATTCTAT GCAGCGAGCT GCCCCAATGC GGACAGCATA
GTGTCGGCCA CAGTGATTGC CGGGATGCAG GCTTCGCAGA TCGTGGGACC CAGTGTGCTG CGCCTCTTCG CCCATGACTG TTTCGTCAAT GGTTGCGACG CCTCGATTAT GCTGGTGGAT
CCGGTCGGAA ATGTGGAGAA AAATGCCGGG GATAATCAAT CCTTGCAACA ACTAGCATTC GACACGATCA ACCAAGCTAA GCTAGCTCTC GAGCAAGCCT GTCCTGGGAT CGTCTCCTGT
GCGGACATCA TAGCTATGGC CGCCGAGGTC GTTGTAAATC AGATGGGAGG ACCATCGTGG ACCGTACTTC AGGGAAGGCT GGACGGGTTT ACCTCTCAAG CAACCGGCGT CGCAGGGCAC
TTGCCAGGTG CACATATGGA CCTGCCCGCC CTGCAGGCAG TTTTCGGGAA CATCGGTCTG GGAGTGCAAG ACATTGTAGT CCTATCAGGA GCCCATTCGG TTGGCTTTTC TCACTGCGTC
GAGTTCACCG ACAGGCTGTA CTCGTTCAAT GGAGTGCCCG GCGCAACGGA TCCGAGTCTG AGCGCAGGAT ATGCGACAAC GCTGCAAGGA ATATGTCCGA ACGGAAACTT CAATCCGACT
ACGTTGCAGC CTCTGGACCC AGTCACGGCG GCCCAGTTCG ACAATGTGTA CTTTCAGCGA TTGCAAATTG GGCAGGGCCT ACTATTCTCG GATCAGATCC TCTTTGTGGA CAACACCACA
ACTGGCCTGG TTACGACGTA CGCCAACAAC GAAGCGCAGT TCTTCAATGA TTTCGTGAAT TCAATGATTG CCATGGGCAA CGCTGGCGTT TTAACCGGCA CCCAGGGCGA AGTCAGGCTA
AATTGCTCCG TGGTGAACAC CGTAAGCAGT CCCCCTGCCC CCGTGGTTCC TCCGCCCACA ACCACACCCA CGCCAGTCCC CGTTCCACCT ACGAATCCCA CTCCCGCAGC TCCGGGTCCA
GCTGCCCCAG TGCCGCCCAC GGTAGATTTG ACTCCTCCAG CACCCGTGGT GATTCCCACA CCCACCGTGC CAACGGGGCC AACCGTAGCG CCGCAGCCCT TCGTTTCTTC ACCTCCGCCT
CCAGCAGGCA CGTCC
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTCCCTCTCT TTATTCTTGT CCTTGTATCA CTGCACTGCA GCCATCCATC GCTAATGCTG CTGCTGCTGC TGCAATCTGT CTAGATCTTT CTCCACCGCA GACCAGCTCA AATATTTGAG
CCTGCTAGTG TCTCGGTGCT CGACATTGGA AGATGCTGGA CATTTTCTTC TGTGCACAGC TTGTTCATCA CGTCAGCTTC TGACTGCGTG CCCAGAGCAG CTAAGCATTT GTATCTACTT
TCTGAGCTGT TGGATACCTT TCGGCTGAGC GAGGCGAGGC GAGGCGAGGC GAGGCGAGGC GAGTAGAGTT GAGTTCAGCT GAGCTGAGCA CACCGCATGC ACCCACCCAC TTGCCACTCA
TTCTCCAAAC TGTTTGTTCG CGCAGTCTGT TGGATCACTG GCCTACTCGT ACGAGAAAAG CGAGAGCTTT CTTCCTCTGC TGTCCTAGGG TAAAGGCAGT CCAATGCAAG GACTGGACCT
TCACTTCTGT CCACATTCTC ATACTCGCTG AATGTCTCTC CATTTCTGGT TGAAGAGGCG CTACTCTTTC CTGGCTCGAC GGCCTGTGCG TGCGATCGCA TCTCGAGAGT GACTATATTT
ACAACATCGA CGAAATCTGA GAAGGTGCTG ACTGTCAGAG TTCAAGAAAA ACCAGTCTGT GAATGTGCGG ACATCCAGCT GAGCTGCACT GCACTGCACG CTCGCTCTGG AAACCAGCTT
CATTATACCG AGAAGGGAGC AGGGGACGCG CACCAAGAAG TGTTCGATCG TTAGGAGCAT TATCTTGCCG GCTCCCCGGT GTAATAGGGT TGTTCACAGG CGTATTTCAT ACAGGCAGGA
CTCGGAAAAT CAGGGGAGAC AGGGACTGTG GACGAGCCTG CCATCCATCC AGCAAACAAG CAAGGAGCTC AGCAAGCAAG CAAGGGGTGG GCACTTTGAA ATCCTTCTGT ACTTCTGCTG
ACCGAATTCG TTCGAGAGCA GGTTTTGAAA TTCGCACACA ACAGGAGGAA TGAAAGGCCG GGAACTCGTA ATTTTGTGGG CGCTGGTGGG AACTCTGTTT TTTGGATCGC TGGATGCCCA
ACTGCAAGCC GGATTCTATG CAGCGAGCTG CCCCAATGCG GACAGCATAG TGTCGGCCAC AGTGATTGCC GGGATGCAGG CTTCGCAGAT CGTGGGACCC AGTGTGCTGC GCCTCTTCGC
CCATGACTGT TTCGTCAATG GTTGCGACGC CTCGATTATG CTGGTGGATC CGGTCGGAAA TGTGGAGAAA AATGCCGGGG ATAATCAATC CTTGCAACAA CTAGCATTCG ACACGATCAA
CCAAGCTAAG CTAGCTCTCG AGCAAGCCTG TCCTGGGATC GTCTCCTGTG CGGACATCAT AGCTATGGCC GCCGAGGTCG TTGTAAATCA GATGGGAGGA CCATCGTGGA CCGTACTTCA
GGGAAGGCTG GACGGGTTTA CCTCTCAAGC AACCGGCGTC GCAGGGCACT TGCCAGGTGC ACATATGGAC CTGCCCGCCC TGCAGGCAGT TTTCGGGAAC ATCGGTCTGG GAGTGCAAGA
CATTGTAGTC CTATCAGGAG CCCATTCGGT TGGCTTTTCT CACTGCGTCG AGTTCACCGA CAGGCTGTAC TCGTTCAATG GAGTGCCCGG CGCAACGGAT CCGAGTCTGA GCGCAGGATA
TGCGACAACG CTGCAAGGAA TATGTCCGAA CGGAAACTTC AATCCGACTA CGTTGCAGCC TCTGGACCCA GTCACGGCGG CCCAGTTCGA CAATGTGTAC TTTCAGCGAT TGCAAATTGG
GCAGGGCCTA CTATTCTCGG ATCAGATCCT CTTTGTGGAC AACACCACAA CTGGCCTGGT TACGACGTAC GCCAACAACG AAGCGCAGTT CTTCAATGAT TTCGTGAATT CAATGATTGC
CATGGGCAAC GCTGGCGTTT TAACCGGCAC CCAGGGCGAA GTCAGGCTAA ATTGCTCCGT GGTGAACACC GTAAGCAGTC CCCCTGCCCC CGTGGTTCCT CCGCCCACAA CCACACCCAC
GCCAGTCCCC GTTCCACCTA CGAATCCCAC TCCCGCAGCT CCGGGTCCAG CTGCCCCAGT GCCGCCCACG GTAGATTTGA CTCCTCCAGC ACCCGTGGTG ATTCCCACAC CCACCGTGCC
AACGGGGCCA ACCGTAGCGC CGCAGCCCTT CGTTTCTTCA CCTCCGCCTC CAGCAGGCAC GTCCTGAACT AACGATCGAA CATTTTTTGG CCGCCTAGTT AACAGGTGGA TTAGATGGAT
CGCTTACATG TACCAATCCT TATACCTTGT CGCCAGTCTC TCACTCAGTC CTTCACAGCA TTCGGTTACG TAGATTTAGA ACGAGTTTAG ATGAGATCTG AGGGAATAAA AGTAGGAACG
AGCTCATTAT TTGTCTAATC GAAACTGTAC CATATGATTC AATAAGAAGA GTATATCCTC GCGCGTCCGA ATTTTT
|
Retrieve as FASTA
|
|
