Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
330 (301) |
PWM (Da): |
35947.66 (32728.1) |
Transmb domain: |
i13-32o |
PI (pH): |
4.36 (4.41) |
Peptide Signal: |
cut: 30 range:30-330 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASDGPTYQW ERLFSSIFFF VVAAVVAEAQ LSTEFYDSTC PQAASIVQAK VDAFVEADRG LAAALMRLHF HDCFVRGCDG SVLLNSTDPN SLTEKSALLN NNSLRGFEQI DEIKMELECA
CPGVVSCADI LALVARDATV KVGGLRWPVF LGRIDGAGSF ADEVNGSLPE RRDNFTKLVE TFAKVGLDAK DMIILSGGHS IGQVHCGAFF ERLYNFQGLN ITDPSMDPEF ADMLKAQCPQ
TKPFGFMALD ATNGTFDSTY YLDLLTNKGL LESDVALLND PLGVEYAIKA VQDPNTFLFE FGMAMIKMGN IPASDPYGWR KHCAFTEPKL
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (introns, contig_492:11971-13655) and RNA seq (isotig28788) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAG ATGGACCAAC ATATCAATGG GAGAGGTTAT TTTCTTCCAT CTTTTTCTTC GTAGTCGCAG CAGTTGTTGC AGAGGCGCAA CTGTCAACGG AATTCTATGA CTCCACCTGT
CCACAAGCTG CATCTATAGT GCAAGCAAAG GTTGATGCGT TCGTTGAGGC TGACCGAGGA TTGGCAGCCG CTCTTATGCG TCTCCACTTT CATGACTGCT TCGTGCGAGT AAGAACGGCT
CCGTCATTTA GCCTGGAGAA AAAGAAAGTT ATTCAGCCAG CTTGATTCTC TCTGATCTGC ATATGAACTT GCAAGTATTA CTATTATGTA TCCTGTCACG TGCGAAATAT GAACCAGACT
GATTCATCTG TTGGAGAGAT AGCCATCTGA TCAGCATGAT ATTCTCCATA ATTTAAGTCG TTTCATACTT TAGCTCCTAC TTAAACTTGA CTCAATTCCT TCGAGTATCT GAACATAAAT
GAATTCGACT CCATTCTGTG TGTCCATTCT GTTGGTGCAG GGCTGTGATG GATCCGTGCT TCTTAACTCA ACAGATCCTA ATAGTCTGAC TGAAAAGTCT GCGTTGCTAA ACAACAACTC
CCTTAGAGGA TTCGAACAAA TCGATGAGAT CAAAATGGAG CTCGAATGTG CATGCCCAGG TGTTGTATCA TGTGCAGATA TTTTAGCTCT GGTGGCCCGT GATGCGACTG TGAAGGTGCT
ACATCGTTTC TTTCTCCTGA ATCTGATTTA ATCGATATGC TTAATCTAAT CAAACTCATC GGTATACATC GTCAATTCTG TTCTCGAAGA GGTCAAAACT GTTCTAAAGG GCTAATAGAT
AAGTTATGTC AAAGGGAAAG TGCTCACTAG GAAGGGCACA TGGTCGTCTA GATAATTTAC AAAAATATCT CTCTTGTTAT GTACACAGGT TGGTGGCTTG AGGTGGCCAG TATTTCTGGG
CCGCATTGAT GGTGCAGGCT CATTTGCAGA TGAGGTCAAT GGCAGCTTGC CTGAACGTAG AGACAACTTT ACTAAGCTTG TCGAAACCTT CGCCAAAGTT GGACTTGATG CTAAGGACAT
GATCATCCTC TCAGGTACTA CTGCTTGAAT TTGTTTCTCT AACTGTAACG TTGAAGATAT AAATACCGCA GCCAGAATTT TAAGTACATA TCAGAAGGCC AAGTGCTTGA AAGCTTTATT
GTCGAGCTCA GTGACTCCTG CATCGTTTCC CTTTCAAGCA TACAGATTCA CTGATTTCTC AATTCTTTAA TGTACCTGTA GGTGGACACT CTATCGGACA AGTCCACTGT GGAGCATTCT
TCGAGCGTCT GTACAACTTC CAAGGTCTAA ATATCACAGA TCCATCAATG GACCCTGAAT TCGCTGACAT GCTAAAGGCT CAGTGCCCTC AGACCAAGCC TTTCGGCTTC ATGGCATTGG
ATGCCACCAA CGGCACATTC GATTCTACTT ACTATTTGGA CCTTTTGACC AACAAAGGTC TTCTTGAGTC GGATGTGGCA CTTTTGAACG ATCCTTTGGG TGTAGAGTAT GCCATCAAAG
CTGTGCAGGA TCCAAACACC TTTCTGTTTG AGTTCGGAAT GGCAATGATC AAAATGGGCA ACATTCCAGC AAGCGATCCT TACGGCTGGA GAAAGCACTG CGCCTTCACC GAACCCAAGT
TGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAG ATGGACCAAC ATATCAATGG GAGAGGTTAT TTTCTTCCAT CTTTTTCTTC GTAGTCGCAG CAGTTGTTGC AGAGGCGCAA CTGTCAACGG AATTCTATGA CTCCACCTGT
CCACAAGCTG CATCTATAGT GCAAGCAAAG GTTGATGCGT TCGTTGAGGC TGACCGAGGA TTGGCAGCCG CTCTTATGCG TCTCCACTTT CATGACTGCT TCGTGCGAGG CTGTGATGGA
TCCGTGCTTC TTAACTCAAC AGATCCTAAT AGTCTGACTG AAAAGTCTGC GTTGCTAAAC AACAACTCCC TTAGAGGATT CGAACAAATC GATGAGATCA AAATGGAGCT CGAATGTGCA
TGCCCAGGTG TTGTATCATG TGCAGATATT TTAGCTCTGG TGGCCCGTGA TGCGACTGTG AAGGTTGGTG GCTTGAGGTG GCCAGTATTT CTGGGCCGCA TTGATGGTGC AGGCTCATTT
GCAGATGAGG TCAATGGCAG CTTGCCTGAA CGTAGAGACA ACTTTACTAA GCTTGTCGAA ACCTTCGCCA AAGTTGGACT TGATGCTAAG GACATGATCA TCCTCTCAGG TGGACACTCT
ATCGGACAAG TCCACTGTGG AGCATTCTTC GAGCGTCTGT ACAACTTCCA AGGTCTAAAT ATCACAGATC CATCAATGGA CCCTGAATTC GCTGACATGC TAAAGGCTCA GTGCCCTCAG
ACCAAGCCTT TCGGCTTCAT GGCATTGGAT GCCACCAACG GCACATTCGA TTCTACTTAC TATTTGGACC TTTTGACCAA CAAAGGTCTT CTTGAGTCGG ATGTGGCACT TTTGAACGAT
CCTTTGGGTG TAGAGTATGC CATCAAAGCT GTGCAGGATC CAAACACCTT TCTGTTTGAG TTCGGAATGG CAATGATCAA AATGGGCAAC ATTCCAGCAA GCGATCCTTA CGGCTGGAGA
AAGCACTGCG CCTTCACCGA ACCCAAGTTG TAG
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Retrieve as FASTA
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