Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
325 (298) |
PWM (Da): |
34081.24 (30999.8) |
Transmb domain: |
i12-34o |
PI (pH): |
6.88 (6.10) |
Peptide Signal: |
cut: 28 range:28-325 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MVTRTRIMPQ GMFAIIMLFS SMYMGSTNVD GAFGRGGLQT GFYALTCPSA EFLVQSAVSN ALSVNKRTGA GLIRLLFHDC FVEGCDASVL LEGPNSEKTA QPNLSLHGFE VIDAAKAAVE
AVCPGVVSCA DILAIAARDS VTLLGGTPYL VETGRRDGTV SLASSTNDIP SPLNDVSALI SSFAKKGLSP TQMVILSGAH TVGKAQCGAF LNRLYPTVDP TLDPAYAAQL QAICPQNGDA
TVLNDLDPTS PLRLDSNYFK NLIQNRGLLT SDQTLFTSGA TKGVVLGNAN FLWSPSFSQA IQAMGRVGVK TGANGEIRRN CHFVN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns, contig_7229:13665-15662) and RNA seq (part, isotig28114) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTGACGA GAACAAGAAT TATGCCACAG GGCATGTTCG CCATAATTAT GCTCTTTTCG AGCATGTACA TGGGGTCAAC CAATGTAGAT GGAGCATTCG GACGAGGGGG ACTTCAAACT
GGATTCTACG CCTTGACATG TCCTTCTGCT GAGTTTTTGG TTCAATCAGC TGTCTCGAAT GCCCTCAGCG TCAACAAACG AACGGGGGCT GGTCTCATCC GACTTCTATT CCACGACTGC
TTCGTTGAGG TGAATACGCA CATCTGAATG GCATTCATGC ACTCTGCACT GCCGACAAAA GATTCCCTAT CTGCATGAGG GAACCGGACG TGAGAATGGA ACGAGGGTCT TGACTGTGAG
TGGCCTTGAG AAAACTGTGT GGACTGCAGA ATCGGCTTCG CATCTCTGTA AAAAAGACAT AGCTTCGAAT CTGATCCTTT CTGATGCGCG AATGTCGCAA GAATTCGAGT TCGTTGTCTG
TATCTTGAGG TTTGACGTTT ACACCTTGAA TTTGATGGAT GAAGAACTCG GACTAATTGT CACACGGGTT AGAGGCGACG GAGGGAAGGT GTTGTTAAAT TGCTGTCAGT ATGACAGCGA
GGATTGTGTA CAGGATCGGT TAATCTGGAC GATGTGTCTA ACTGGTGATT GAATTCATCT CTGCTTGATG GATCAGGGAT GTGATGCATC TGTTTTGCTC GAAGGGCCAA ATTCCGAGAA
AACTGCACAA CCCAATCTAT CGCTGCATGG ATTCGAAGTG ATAGACGCTG CAAAGGCTGC AGTTGAGGCT GTCTGTCCGG GCGTAGTCTC GTGTGCTGAC ATCCTAGCGA TCGCTGCTCG
AGACAGTGTT ACTCTGGTAC GTCTCCAATT CGAGTCTGTC ACTCTTGTTT CTGTCTATCC AAAGATTTCA TCAAGCCTTG CATGTGAGAC GCTTCAAGCT AATTCTTCAC ATAGCAGCCG
CTGTAGACCG TGCTCATCAT CATTTCGAAG TTGTTGATGA TCTGGATGTT CTGGGAATCT ACGTGCAGCT CGGAGGCACT CCTTACCTCG TTGAGACAGG CCGTAGGGAT GGAACCGTAT
CACTGGCCTC GAGCACAAAT GACATTCCGT CTCCGCTTAA CGACGTATCG GCTCTCATCA GCAGTTTCGC CAAGAAGGGA CTAAGTCCAA CTCAGATGGT TATCCTTTCA GGTAAGAAAG
AATAAACTTG TAGATATTTG AGTGTCTACC TTTGCCGAAA TTTCGAATGA CCATTACCTT CGATGAACTT TTTCCCAGCA AATCTGTTGG TGGTCGTTGA TCCAAAGTGC TGCAGTGATC
TAGATCTAGA GCCTAGTCGT TTCTTCCTCT TGTATTGTGG AGGCAATGTC CATCGAACGA ATGCGGGAAT TAGATTTGGC CAGAGATGAA TATGTGTCCA GAGCTCTCGG TCAGCAGTGA
AGGAATCATA CGTTTGTTGA TAACTTACAA GATTAGCATT TTAAAGTCTG CCACTAAGAG CAGTTCCGGC TCCATATAAA TCACAAAGAT AATGATTGCA GAAGCTAAAA CAAGCCTCCA
TGGACCTTCT CTTTGCTAGC AGTGATGAAG TGAAAGTGGT CATGTTGTGC AGGCGCTCAC ACAGTGGGAA AAGCACAATG CGGAGCGTTT CTCAACCGTC TGTATCCTAC CGTCGACCCC
ACCCTTGACC CCGCCTACGC AGCGCAATTG CAAGCTATCT GCCCTCAAAA CGGAGACGCC ACCGTCCTGA ACGATTTGGA CCCAACTTCG CCTTTGAGGT TGGACAGCAA CTACTTCAAG
AACCTTATCC AGAACAGAGG TTTGCTAACC TCCGATCAAA CTTTGTTTAC ATCAGGAGCC ACCAAAGGTG TGGTTCTTGG CAATGCCAAC TTTTTGTGGT CACCCAGCTT CTCGCAGGCC
ATTCAAGCCA TGGGTCGCGT TGGAGTGAAG ACAGGTGCCA ATGGTGAGAT CCGCAGAAAC TGTCACTTTG TCAACTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTGACGA GAACAAGAAT TATGCCACAG GGCATGTTCG CCATAATTAT GCTCTTTTCG AGCATGTACA TGGGGTCAAC CAATGTAGAT GGAGCATTCG GACGAGGGGG ACTTCAAACT
GGATTCTACG CCTTGACATG TCCTTCTGCT GAGTTTTTGG TTCAATCAGC TGTCTCGAAT GCCCTCAGCG TCAACAAACG AACGGGGGCT GGTCTCATCC GACTTCTATT CCACGACTGC
TTCGTTGAGG GATGTGATGC ATCTGTTTTG CTCGAAGGGC CAAATTCCGA GAAAACTGCA CAACCCAATC TATCGCTGCA TGGATTCGAA GTGATAGACG CTGCAAAGGC TGCAGTTGAG
GCTGTCTGTC CGGGCGTAGT CTCGTGTGCT GACATCCTAG CGATCGCTGC TCGAGACAGT GTTACTCTGC TCGGAGGCAC TCCTTACCTC GTTGAGACAG GCCGTAGGGA TGGAACCGTA
TCACTGGCCT CGAGCACAAA TGACATTCCG TCTCCGCTTA ACGACGTATC GGCTCTCATC AGCAGTTTCG CCAAGAAGGG ACTAAGTCCA ACTCAGATGG TTATCCTTTC AGGCGCTCAC
ACAGTGGGAA AAGCACAATG CGGAGCGTTT CTCAACCGTC TGTATCCTAC CGTCGACCCC ACCCTTGACC CCGCCTACGC AGCGCAATTG CAAGCTATCT GCCCTCAAAA CGGAGACGCC
ACCGTCCTGA ACGATTTGGA CCCAACTTCG CCTTTGAGGT TGGACAGCAA CTACTTCAAG AACCTTATCC AGAACAGAGG TTTGCTAACC TCCGATCAAA CTTTGTTTAC ATCAGGAGCC
ACCAAAGGTG TGGTTCTTGG CAATGCCAAC TTTTTGTGGT CACCCAGCTT CTCGCAGGCC ATTCAAGCCA TGGGTCGCGT TGGAGTGAAG ACAGGTGCCA ATGGTGAGAT CCGCAGAAAC
TGTCACTTTG TCAACTAG
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Retrieve as FASTA
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