Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
333 (308) |
PWM (Da): |
35580.01 (33029.6) |
Transmb domain: |
i7-26o |
PI (pH):
| 6.61 (6.24) |
Peptide Signal:
| cut: 26 range:26-333 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASSRVHCTW VLVASLVLLA TLGAAADNQF AAGLSENFYD SSCPQAASIV DAFVTNYLKK DGTFAGAFNR LQFHDCWVGG CDGSVLLNST ATQPAEREAH VSFGLRGIVE IDEIKAALEF
FCPGVVSCAD IIIMAARDAT VKVGGPAWPI ALGRRDGVQS TDLMADTNLP FPVLNFSGLV ANFAVKGFNA REMITLSGAH TIGQSHCNGV LPHLYNFTGK DDPTDIDPAM EVGFSVLLKT
LCPQGNRTRT MFIDSTAHRF DRLYYKNVLE GKGVLITDSA LITDPVGKEV VRSFSKRSST FFAEFAAAVV KLGNLGVLTG TKGEIRKTCQ FVN
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (3 introns, contig_3309:46336-48268) and RNA seq (isotig29211) |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCTT CCAGGGTCCA CTGCACTTGG GTGCTTGTAG CCAGCTTGGT ACTTTTGGCA ACACTTGGTG CAGCTGCAGA TAATCAATTT GCGGCCGGCC TCTCGGAGAA TTTCTACGAT
AGTTCGTGCC CCCAAGCAGC TTCCATCGTA GATGCCTTTG TGACCAATTA TCTCAAGAAG GACGGGACCT TTGCTGGTGC CTTCAACAGA TTGCAGTTCC ACGATTGCTG GGTTGGGGTA
AAACTCCTCT GATGCTCTTT TCTTTCCATA CATAGATCGT GAATTGCTCA TTCTGTTCAG GGCTTGCCTC ACGTACCAAA CTGAAATCCT GCATCTTGCC CGAGATCACA TGATGACTGA
TGAAGCTTGA ACTTTGAAAT GTGAAGGCTT GTGAATTTGT AATATTGAGG GCATTGCAAA TGCCAGACAC TACTCTCTAT TCTTCTTCAA AGTCGGTAGA CTAGAACCAG GGACCTTCGT
TCCTGTAATC TCAAGTGCAG TTGCTGAATT GTTCGTCTGA CCCGACGGTT CTACAGGGTT GTGACGGATC TGTACTCCTG AACTCAACCG CAACGCAACC AGCAGAGAGG GAAGCTCACG
TAAGTTTTGG GCTTCGAGGT ATTGTGGAAA TCGATGAAAT CAAAGCAGCC CTGGAATTCT TCTGCCCGGG AGTTGTGTCC TGCGCAGATA TCATCATTAT GGCAGCCCGC GATGCCACAG
TGAAAGTAAG TGTCCTGAAT CCTCATTTAG CAACCTAGCT TCCTGGGATC CGATCACCGC GTACCAGGTC GATGATATTC CAAGACTTTA ATTTTTGGAC AGATTACCAC GGTGACATGC
CCTTGACGCA TATACATTGT ACCGGTAGAT CTGCCATCTC TGTGTCCATC TCATCATGAA TTGGATTCGG ATTGCGTCTC CTTCGATTGA CGGTCATTTA TAATCAGGTG GGAGGTCCAG
CATGGCCCAT CGCTTTGGGT CGTAGAGATG GAGTTCAGTC CACGGACTTG ATGGCGGACA CCAATCTGCC ATTCCCCGTG TTGAACTTCA GCGGACTCGT CGCCAACTTC GCAGTCAAGG
GTTTCAACGC CAGAGAAATG ATCACGCTCT CAGGTACGAA GGCTCACCGC CATCATCATC AGTTAGCGCT GGCTGCGCGC ATTTTCATGT GGCATGTGAA ATTGACTGAA CATGAGAGAT
ATCTTGCATT TGTCAGCGAG GTGTCACCTT AACACGATGA TACAAAAGCC GACAATGATC TCGAGGTCGG CAGTGAAGCT GGCTCCACCT CGTTACAATA TTCGGTTGCT CGTCTTGGAA
GAGCAAATTA CAGATAGAAA TCCATTGCAA TCAGCTGTCT CGGAGAACGA AGTGCACTTG GACTCAAAAT CAGACAGTCC AGATGCGTTC GGCACACCTT GCGCGATGAT CGATACACAA
ACTGATAGCC AGTTAAGACA CTAGCGTGTG TAAACTTTGG TAAACTTACG TCGATCGCCG ACTGATTGCT CATCGTGAAA CAGGTGCGCA CACTATAGGC CAGTCCCATT GCAATGGCGT
CCTCCCACAT CTGTACAACT TTACCGGAAA GGATGACCCT ACGGACATCG ACCCGGCCAT GGAAGTGGGA TTCTCTGTCC TTCTCAAGAC CCTTTGTCCG CAGGGCAACA GGACCAGAAC
GATGTTCATC GACTCAACGG CACATCGCTT CGATCGCCTC TATTACAAGA ATGTCCTGGA AGGAAAAGGA GTTCTGATCA CGGACTCTGC CCTCATCACT GACCCCGTAG GCAAGGAGGT
CGTTCGGTCC TTCTCCAAGC GCAGCTCCAC TTTTTTCGCC GAGTTCGCGG CTGCTGTGGT GAAACTGGGC AATCTTGGGG TGCTCACCGG AACGAAAGGT GAAATCCGCA AGACATGCCA
ATTCGTCAAC TAG
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCTT CCAGGGTCCA CTGCACTTGG GTGCTTGTAG CCAGCTTGGT ACTTTTGGCA ACACTTGGTG CAGCTGCAGA TAATCAATTT GCGGCCGGCC TCTCGGAGAA TTTCTACGAT
AGTTCGTGCC CCCAAGCAGC TTCCATCGTA GATGCCTTTG TGACCAATTA TCTCAAGAAG GACGGGACCT TTGCTGGTGC CTTCAACAGA TTGCAGTTCC ACGATTGCTG GGTTGGGGGT
TGTGACGGAT CTGTACTCCT GAACTCAACC GCAACGCAAC CAGCAGAGAG GGAAGCTCAC GTAAGTTTTG GGCTTCGAGG TATTGTGGAA ATCGATGAAA TCAAAGCAGC CCTGGAATTC
TTCTGCCCGG GAGTTGTGTC CTGCGCAGAT ATCATCATTA TGGCAGCCCG CGATGCCACA GTGAAAGTGG GAGGTCCAGC ATGGCCCATC GCTTTGGGTC GTAGAGATGG AGTTCAGTCC
ACGGACTTGA TGGCGGACAC CAATCTGCCA TTCCCCGTGT TGAACTTCAG CGGACTCGTC GCCAACTTCG CAGTCAAGGG TTTCAACGCC AGAGAAATGA TCACGCTCTC AGGTGCGCAC
ACTATAGGCC AGTCCCATTG CAATGGCGTC CTCCCACATC TGTACAACTT TACCGGAAAG GATGACCCTA CGGACATCGA CCCGGCCATG GAAGTGGGAT TCTCTGTCCT TCTCAAGACC
CTTTGTCCGC AGGGCAACAG GACCAGAACG ATGTTCATCG ACTCAACGGC ACATCGCTTC GATCGCCTCT ATTACAAGAA TGTCCTGGAA GGAAAAGGAG TTCTGATCAC GGACTCTGCC
CTCATCACTG ACCCCGTAGG CAAGGAGGTC GTTCGGTCCT TCTCCAAGCG CAGCTCCACT TTTTTCGCCG AGTTCGCGGC TGCTGTGGTG AAACTGGGCA ATCTTGGGGT GCTCACCGGA
ACGAAAGGTG AAATCCGCAA GACATGCCAA TTCGTCAACT AG
|
Retrieve as FASTA
|
|