Entry information : MpalPrx[P]116
Entry ID 15460
Creation 2018-09-06 (Christophe Dunand)
Last sequence changes 2018-09-06 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2021-04-12 (Christophe Dunand)
Peroxidase information: MpalPrx[P]116
Name MpalPrx[P]116
Class Class III peroxidase     [Orthogroup: Prx250]*
Taxonomy Eukaryota Viridiplantae Streptophyta Marchantiaceae Marchantia
Organism Marchantia paleacea    [TaxId: 56867 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MpalPrx[P]116
start..stop
S start..stop
MpalPrx117 393 3e-138 5..315 4..319
MpPrx117 391 9e-138 5..315 4..319
MpalPrx115 379 9e-133 3..315 6..322
MpPrx115 375 2e-131 1..315 3..322
Literature and cross-references MpalPrx[P]116
Protein sequence: MpalPrx[P]116
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316 (294)
PWM (Da):   %s   33478.94 (31092.6)  
PI (pH):   %s   9.78 (9.63) Peptide Signal:   %s   cut: 23 range:23-316
Sequence
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Send to Peroxiscan
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MASRQLIAAF LLFGLLAATA NGQLSESFYA AKCPQGPAKA LDGVKFWVQK DRFLAPSLLR LHFHDCFVRG CDASVLLDSM NGVPGEKEGM GNKGSLRGFE VIDDIKMQVE ALCPxVVSCA  DILALAARxx xxxLASEANT DLPPPFSDYN TLVIMFAKKG LNARDMSSMN LSSRSHxxxS GSHTVGKANC AVMQSRLYNF TSVVATDPFL xPVFAASLKK QCKPGDFSTK IKMHQSKWAD 
SWVYNYFSNV LRGRALFQSD DALKRSSAGL KVVQTMNRVG SPFDREFGNS MIKMGRADIL TGTQGQIRKK CNFVNR* 

Retrieve as FASTA  
Remarks Pseudogene from genomic (contig_7496:25882-27568). Frame shift and missing part. Short isotig (isotig29619 and part, isotig36910, isotig33796).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCATCAA GGCAGCTGAT TGCTGCTTTC CTACTTTTCG GGCTACTAGC GGCAACAGCT AATGGTCAAC TCTCTGAGTC CTTCTATGCC GCCAAGTGCC CTCAAGGCCC CGCCAAGGCG  CTCGACGGGG TCAAGTTTTG GGTGCAGAAG GACAGGTTCC TCGCCCCATC TCTCCTGAGG TTACACTTCC ATGACTGTTT CGTTCGGGTA TTTACGCCTA TCTCCATCGT TATATCATCA  TCACATTCCA CTATGAAAAC TCGACCTTAG TTCTCGAGGT TCTTGTAGAA TCAGTTCAAT GGAGGATAAT CCAGGCTGCT CACAGGCCAC AGAGATGTAA TTTCGGTCCG CTGATCATGT  GTTTGTGCCA TGGCTCAATG CACTTCAGGG GTGCGATGCA TCTGTTCTCT TGGACTCGAT GAATGGCGTA CCTGGCGAGA AGGAGGGCAT GGGCAACAAA GGCTCTCTCA GGGGATTTGA  GGTTATCGAC GACATTAAGA TGCAGGTCGA AGCCTTGTGC CCACCCTTGG GTCGTCTCCT GCGCCGACAT CCTTGCTCTG GCTGCCAGAC GCCATCGTGG TGGTATGTTG GTCTTGCTAA  CTCGAAACAC TGGAAAATTA TGCTGAGCTC GGAGAAATGC TGAGGAGATG CAATGACGTA ACCCGCAAAT TTTGAGCCAA ACTTCTCAAA TCTCATGCAA TGTTGGATTG CTAGAAGAGC  ATTTTTTGAG CTCAAACACC ACTTGGAGAC AGAGTTGTAA ATTCGGCGAG CATATACAAA AACAAGGTGC CAGTTCGATA TTGTTTCCAC CATGACGAGT CCCGGTACTT CCTAATTGCA  GATGGGAGGA GGAGCAAACT GGAGCGTCCC TCTAGGTCGA CGCGAGGGTG TGCAATCTTG GCATCGGAAG CCAACACCGA CCTTCCACCT CCATTTTCCG ACTACAATAC CCTCGTCATC  ATGTTCGCCA AGAAGGGCCT CAACGCCAGG GACATGGTTG TGCTGTCAGG TGAATCGACT TGACACTGCA CTAGGCCAAC AGAGACGACT ACGATCTACA GCTTAGCATC AGTAGTCAAG  TGATGACAAG GACTATTGGT GCACATTCCT TTTACAGTCT TCTATGAATC TATCGTCTCG ATCTCATGCT ATTTTCTTCC TGCCCTTATG GATCATGGGA GCACGATTTC TCGCTTATAG  CACGCTGGTC ATCAGCACCG ATGTAGTGAG AGACTATGGG GATGACTTCC GGGAGCCTAT ATATCTGACT CCAGGAGTTT GGCAATTCAG GTTCGCACAC CGTCGGGAAA GCAAACTGCG  CGGTCATGCA AAGTCGACTT TACAACTTCA CTTCAGTCGT GGCCACAGAC CCGTTTTTGC TGCGTCATTG AAGAAGCAGT GCAAGCCAGG AGACTTCAGC ACCAAAATTA AGATGCATCA  GAGCAAGTGG GCGGATTCTT GGGTCTACAA CTATTTCTCC AATGTACTCC GAGGCAGGGC TCTGTTCCAA TCCGACGATG CTTTGAAGAG ATCCTCAGCT GGCCTCAAGG TCGTGCAGAC  CATGAACAGA GTAGGAAGTC CTTTCGACAG GGAGTTTGGA AACTCTATGA TCAAGATGGG ACGAGCAGAC ATCCTCACTG GCACCCAAGG CCAAATCAGG AAGAAATGCA ACTTTGTGAA 
CAGGTGA 

Retrieve as FASTA