Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
337 (313) |
| PWM (Da): |
36432.2 (33745.8) |
|
| PI (pH): |
5.44 (5.43) |
Peptide Signal: |
cut: 25 range:25-337 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MKSCTCMCLL SILGLLLLTT VTNADNDTRL DLDYYSETCP NATSIVKQMV KNIVAEKSNM AGGLLRLHFH DCFVKGCDAS VLLNSTDTNA AEKDAPSNSG IATLRGYDHI DNIKAAIEAD
CPGIVSCSDI LALAARDATV LVGGLNWSVA LGRKDGLVSN ESEATELLPS FSMTYDELVE NFAAVGFSQG EMVVLSGGHT IGRASCLAVW PRLYDFNGVA GQTDPSIDSK LAVELKKQCP
QNQTGSILSM DSTENTFDNL YFKAVLANKG LFQSDANLLA NPVGKKLVEK YSKRGATFKR DFAAAMEKMS NIRGALEGQI RRVCTKVNRR PEIHDEY*
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic (introns 1 and 2, contig_2942:9583-10173) and RNA seq (part, isotig29342) |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAATCCT GTACCTGTAT GTGCCTGTTA AGTATCCTCG GGCTTTTACT ATTAACGACT GTAACAAATG CTGATAACGA TACTCGTCTA GATCTGGATT ACTATTCGGA AACGTGTCCA
AATGCAACGT CTATAGTGAA GCAAATGGTG AAGAACATTG TGGCTGAGAA GAGTAACATG GCGGGAGGGC TTCTGCGATT ACATTTTCAT GACTGCTTCG TGAAGGTGAG TTGTCAGGCT
TCAGTGTGGT ACCTTTTGGG TCCAAATTGT ATTTTCGCAG TAGGGTGTCA TCAGGACCTT CCCATGAGAT GGAGTCAATA TACGAACAAA TTTCTTCTGA GATATTTAGC AGGTCATTAA
ATGAGGGCAA TGTCCATGTC TTGGGATCAC TGGCTGACCA GAGATGTCCA CTGTACAGGG TTGTGATGCA TCGGTACTCC TCAACTCAAC TGATACCAAC GCAGCAGAGA AAGATGCACC
ATCAAACTCT GGAATAGCTA CGCTCAGAGG ATACGACCAC ATTGACAACA TCAAAGCAGC GATAGAAGCT GATTGCCCGG GCATTGTGTC ATGCTCCGAT ATTTTGGCTC TCGCTGCTCG
TGACGCCACT GTTCTGGTAT ATTGCAAGTC CTAATGCTGC ATATCAAGGG TGTATTTCAG TGACTGAACG AACATATATT CATAACACTT AGATGATATC CAGTTTTTTG AACTTTGTTG
TAAAGCTAGG CCAACACGTT GAAGGTTGTC GAATCGTAAG TATTTATGAT CTGTCAGGTT GGAGGGCTAA ACTGGTCCGT GGCTTTGGGC CGCAAAGATG GCTTGGTTTC TAATGAATCT
GAAGCAACCG AGCTGCTTCC ATCTTTCTCA ATGACGTACG ACGAATTGGT GGAGAATTTT GCTGCAGTAG GATTTAGCCA AGGGGAGATG GTGGTTCTTT CAGGAGGTCA CACCATCGGC
CGAGCCTCTT GCTTGGCAGT TTGGCCTCGT TTGTATGATT TTAATGGAGT CGCAGGCCAA ACAGACCCGT CAATTGACAG CAAATTAGCG GTGGAGCTCA AGAAACAGTG CCCTCAGAAT
CAGACGGGAA GCATCCTGTC TATGGATTCA ACGGAAAACA CGTTCGACAA TCTTTACTTC AAGGCAGTCC TTGCCAACAA GGGTCTGTTC CAATCAGATG CAAATCTATT GGCGAATCCA
GTTGGAAAGA AGCTTGTTGA GAAATACTCG AAGCGAGGAG CAACTTTCAA GCGCGATTTT GCGGCAGCTA TGGAGAAGAT GAGTAATATT AGAGGGGCAC TTGAAGGACA AATTCGCCGA
GTTTGTACAA AAGTAAATCG AAGACCTGAA ATACATGACG AATACTAG
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAAATCCT GTACCTGTAT GTGCCTGTTA AGTATCCTCG GGCTTTTACT ATTAACGACT GTAACAAATG CTGATAACGA TACTCGTCTA GATCTGGATT ACTATTCGGA AACGTGTCCA
AATGCAACGT CTATAGTGAA GCAAATGGTG AAGAACATTG TGGCTGAGAA GAGTAACATG GCGGGAGGGC TTCTGCGATT ACATTTTCAT GACTGCTTCG TGAAGGGTTG TGATGCATCG
GTACTCCTCA ACTCAACTGA TACCAACGCA GCAGAGAAAG ATGCACCATC AAACTCTGGA ATAGCTACGC TCAGAGGATA CGACCACATT GACAACATCA AAGCAGCGAT AGAAGCTGAT
TGCCCGGGCA TTGTGTCATG CTCCGATATT TTGGCTCTCG CTGCTCGTGA CGCCACTGTT CTGGTTGGAG GGCTAAACTG GTCCGTGGCT TTGGGCCGCA AAGATGGCTT GGTTTCTAAT
GAATCTGAAG CAACCGAGCT GCTTCCATCT TTCTCAATGA CGTACGACGA ATTGGTGGAG AATTTTGCTG CAGTAGGATT TAGCCAAGGG GAGATGGTGG TTCTTTCAGG AGGTCACACC
ATCGGCCGAG CCTCTTGCTT GGCAGTTTGG CCTCGTTTGT ATGATTTTAA TGGAGTCGCA GGCCAAACAG ACCCGTCAAT TGACAGCAAA TTAGCGGTGG AGCTCAAGAA ACAGTGCCCT
CAGAATCAGA CGGGAAGCAT CCTGTCTATG GATTCAACGG AAAACACGTT CGACAATCTT TACTTCAAGG CAGTCCTTGC CAACAAGGGT CTGTTCCAAT CAGATGCAAA TCTATTGGCG
AATCCAGTTG GAAAGAAGCT TGTTGAGAAA TACTCGAAGC GAGGAGCAAC TTTCAAGCGC GATTTTGCGG CAGCTATGGA GAAGATGAGT AATATTAGAG GGGCACTTGA AGGACAAATT
CGCCGAGTTT GTACAAAAGT AAATCGAAGA CCTGAAATAC ATGACGAATA CTAG
|
Retrieve as FASTA
|
|
