Entry information : LePrx[P]83(Solyc10g075120.1.1 [2.3])
Entry ID 15835
Creation 2019-04-19 (Christophe Dunand)
Last sequence changes 2019-04-19 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2019-05-10 (Christophe Dunand)
Peroxidase information: LePrx[P]83(Solyc10g075120.1.1 [2.3])
Name LePrx[P]83(Solyc10g075120.1.1 [2.3])
Class Class III peroxidase     [Orthogroup: Prx012]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx[P]83
start..stop
S start..stop
LePrx51 364 1e-128 1..195 1..195
StPrx33 360 8e-127 1..195 1..195
LePrx13 359 2e-126 1..195 1..195
LePrx44 349 8e-123 1..195 1..196
Literature and cross-references LePrx[P]83(Solyc10g075120.1.1 [2.3])
Protein sequence: LePrx[P]83(Solyc10g075120.1.1 [2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   219
PWM (Da):   %s   24324.3  
PI (pH):   %s   5.27
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASSYSFVFL HVLVIFCLAH TAFSDLSDDF YDDICPQALP TIRRVVEDAI SQERRMGTSL LRLHFHDCFV NGCDASIPLD QTATIDSEKT ALANNNSARG FEVIDRIKSE VDKVCGRPVI 
SCADILAVAA CDSVVALHGP TWEVELGRRD STTASRTIAD NDIPTPFRDL STLVDNFKKQ GLDEEDLVAL SGAHTHQTKL LYRIIHQNNI FIKNFIKLV* 

Retrieve as FASTA  
Remarks Last exon is nor found in the DNA seq. Probably a pseudogene.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAA GTTATAGCTT CGTATTTCTT CATGTGTTAG TCATATTTTG TCTAGCACAC ACGGCTTTTT CGGATTTATC AGATGATTTC TACGATGATA TTTGTCCCCA AGCTTTACCA  ACCATTAGAC GGGTTGTTGA GGATGCAATC AGCCAAGAGA GGCGTATGGG CACCTCTTTG CTACGTTTAC ATTTTCACGA TTGTTTTGTT AACGTGAGTT TAATTTCTTT CTCTCCTAAC  TAGCTAGTTA ACGTTTGGTA ATTGCTTGAA ATGTTGTTAC TAATTATACT TATAATAACG TAGGGTTGTG ACGCTTCAAT TCCTCTTGAT CAAACGGCTA CTATTGATAG TGAGAAGACT  GCTCTTGCTA ATAACAATTC TGCTAGAGGA TTTGAGGTGA TCGATAGAAT CAAATCAGAG GTTGATAAAG TTTGTGGACG TCCAGTTATA TCTTGTGCGG ACATATTGGC TGTTGCAGCT  TGTGACTCTG TTGTTGCTGT GCGTATCACT CATTTTTTCA CCTAATATAT GTAAGCTAAA GTTAATTTAG TGTATAATTG AACTGATAAG TATTTTGTTA CATTGACACA GTTACATGGA  CCAACATGGG AAGTGGAACT AGGAAGAAGG GATTCTACTA CTGCAAGTAG AACCATTGCT GACAATGACA TTCCAACACC GTTCAGGGAC TTATCTACAC TTGTCGACAA CTTTAAGAAG  CAAGGTTTGG ATGAGGAAGA CCTCGTTGCT CTCTCCGGTG CCCACACACA TCAAACTAAG TTATTATATA GAATAATTCA TCAAAATAAT ATATTTATCA AAAATTTTAT AAAACTAGTA 
TAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAA GTTATAGCTT CGTATTTCTT CATGTGTTAG TCATATTTTG TCTAGCACAC ACGGCTTTTT CGGATTTATC AGATGATTTC TACGATGATA TTTGTCCCCA AGCTTTACCA  ACCATTAGAC GGGTTGTTGA GGATGCAATC AGCCAAGAGA GGCGTATGGG CACCTCTTTG CTACGTTTAC ATTTTCACGA TTGTTTTGTT AACGGTTGTG ACGCTTCAAT TCCTCTTGAT  CAAACGGCTA CTATTGATAG TGAGAAGACT GCTCTTGCTA ATAACAATTC TGCTAGAGGA TTTGAGGTGA TCGATAGAAT CAAATCAGAG GTTGATAAAG TTTGTGGACG TCCAGTTATA  TCTTGTGCGG ACATATTGGC TGTTGCAGCT TGTGACTCTG TTGTTGCTTT ACATGGACCA ACATGGGAAG TGGAACTAGG AAGAAGGGAT TCTACTACTG CAAGTAGAAC CATTGCTGAC  AATGACATTC CAACACCGTT CAGGGACTTA TCTACACTTG TCGACAACTT TAAGAAGCAA GGTTTGGATG AGGAAGACCT CGTTGCTCTC TCCGGTGCCC ACACACATCA AACTAAGTTA 
TTATATAGAA TAATTCATCA AAATAATATA TTTATCAAAA ATTTTATAAA ACTAGTATAA 

Retrieve as FASTA