View Redoxidase 15933

Entry information : LeRboh04(Solyc11g072800.1)

Entry ID	15933
Creation	2019-10-24 (Christophe Dunand)
Last sequence changes	2019-10-24 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2019-10-24 (Christophe Dunand)

Peroxidase information: LeRboh04(Solyc11g072800.1)

Name

LeRboh04(Solyc11g072800.1)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Solanaceae Solanum

Organism

Lycopersicon esculentum (Tomato) [TaxId: 4081 ]

Cellular localisation

N/D

Tissue type

Roots

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LeRboh04 start..stop	S start..stop
LeRboh08	1236	0	15..817	65..831
EgrRboh06	1141	0	14..816	67..857
EglRboh06	1140	0	14..816	67..857
EguRboh06	1138	0	9..816	62..857

Literature and cross-references LeRboh04(Solyc11g072800.1)

Protein sequence: LeRboh04(Solyc11g072800.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	816
PWM (Da):	93609.78	Transmb domain:	o275-293i306-328o358-380i408-430o456-478i643-660o
PI (pH):	9.17

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MGETPIENGG GGRTKMVRIE SGAARGFKSL HFLDNTTGKE ADAWKNVEKR FHINAVNGIL FKDKFGPSIG MKSFFFKKNK IGARGKKGFL STELLNLCDI VFLFFSEMKG MESKEFAEEL FDTMARRKKI NAENGITIEE LKEFWDDIST HCPDTRLHIF FDMCDKNGDG KLSEEEVKEV LVMSASANKL TNFKKHAATY AALIMEEFDP DHLGYIEIWQ LESLLRGMVG SEDGQNNMKR SQTLAKTMIP RQYRTPVSKF LSKTSEKIYD NWKRIWVVTL WLSINFILFI WKIEQFKRRE AFKIMGYCVC LAKAAGETLK FNMALILIPV CRRTLTQIRE SFLGYIIPFD DNINFHKMVA VGITVGAFIH ILFHTSCNFV KLASCPESKF MTALGSNFGY QQPTYMDLVV SVPGVTGILM TLFMLFSFTL ATHSFRRNII KLPGSFHHLA GFNAFWYAHH LLIFVYVLLI LHGCFIFLTN EWYKKTTWMY LAVPVVLYST ERVLIINENR YHVNIQKAVI YAGNVLALYM TKPPGFKYKS GMYLFVKCPD ISNFEWHPFS ITSAPDEDYL SVHIRTLGDW TTELRTRFEK ACQEAPSKTR NLVRMETKAY NQKDAEQSQA ENPMIIIKGP YGAPAQNYKK YDILLLVGLG IGATPFISII KDILNQKSGY NQQDDGKKGP QRAYFYWVTR EQGSFDWFKG VMDDIAEHDE NEVIEMHNYL
TSVYEEGDAR SALITMVQSL QHAKNGVDVV SESRIRTHFS RPNWKRVFAQ LAVTHPSSRI GVFYCGSPTL TKPLKKLCQE FSLNSSTRFN FHKENF*

Retrieve as FASTA

Remarks

Complete sequence from genomic and 3 ESTs

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGGAGAAA CCCCTATAGA AAATGGAGGA GGAGGAAGAA CAAAAATGGT TAGAATAGAA TCAGGGGCAG CAAGAGGGTT CAAGAGCCTT CATTTTCTTG ATAATACAAC AGGAAAAGAA GCAGATGCTT GGAAAAATGT TGAGAAAAGA TTTCATATAA ATGCTGTTAA TGGCATTCTT TTTAAAGACA AATTTGGACC CTCTATAGGT ATGAAAAGTT TCTTTTTTAA AAAAAATAAA ATCGGGGCTA GGGGAAAAAA GGGATTTTTA TCAACTGAGC TACTAAATTT ATGTGATATT GTTTTTTTAT TTTTTTCTGA AATGAAAGGA ATGGAAAGCA AGGAATTTGC AGAGGAGTTG TTTGATACAA TGGCAAGGAG AAAGAAGATT AATGCAGAAA ATGGGATAAC AATTGAGGAA CTTAAAGAAT TTTGGGATGA TATATCAACT CATTGCCCTG ATACAAGGCT TCATATTTTC TTTGACATGT GAGAAATTTT CCATTCCTTT TTTTTTGTTT TGTTCACGAT TTGAAGCTTA TGAGTTCTGG ATTCTAATCT TTTAAAGTTA CAGAGTTGTG TGCATATTCA ATAGGATTTT TAAATATGTA TATATGGTTT GAACTAAAGT ATGGCCTAGC TGGGGGTTAG GGAGGGAAGA AAAACTAATA ACATATGCTG GAGGGCCTAA ACTTGTCAAT CTTGTAGTAC GAATGAATTC ATGATTTTAA CTTGATGGAT TCAATGTGTA ATGTTCTTAA GATTAAACAC GTTGTACTTT TGAAATTATG AGACCAAAAT TCGATATTTT TTCTTATTTT AGTGGTTTTT CATGCATGTG TTCAGGGGCG AAGTCAGGTA GGGTCAAGGG TTCATCCAAA TCCCCTTAGA TGAAAACTTA CATTGTAGTA TTATTTTTTA TGCATACATT GTAACTATCG GATCCCCTTA GTGAAAATTC TTGCTACGTA TTCTAGCTTG AAGATACGGA GTTCAGATGA ACTCGTTGTT TAAAAGCTCC ATTGTTCTTT GTTTTTCAGG TGTGACAAGA ATGGTGATGG GAAACTATCA GAAGAAGAGG TCAAGGAGGT GAGAAAAACA TACTCACAAG TGAATTTGTT CTTTGTTTAT TTTGGGAGTC AGTCTACTTA ATACTTTTTT GTGAAAGGTT CTAGTGATGA GTGCTTCAGC CAACAAATTG ACAAACTTCA AGAAACATGC AGCAACATAT GCAGCTTTAA TCATGGAAGA GTTCGATCCT GATCATTTAG GATATATTGA GGTAAAATTC CACTTAAAGT TGCCATCTTT CTATACGAAG TCGTCTTCTT TTTGTTTTAA AAATTCAACT TTGAAACAGA TATGGCAACT TGAATCTCTA CTAAGAGGAA TGGTTGGATC AGAAGATGGG CAAAATAACA TGAAGAGATC ACAAACATTA GCAAAAACCA TGATCCCTAG ACAATATAGA ACTCCAGTGA GCAAGTTTTT AAGCAAAACT TCAGAGAAGA TATACGATAA CTGGAAAAGA ATTTGGGTCG TAACGTTGTG GTTGTCCATT AATTTCATAC TATTTATATG GAAGATTGAA CAATTTAAAA GGAGAGAAGC CTTCAAGATT ATGGGATATT GTGTCTGTTT AGCTAAAGCT GCAGGGGAAA CTCTCAAGTT CAATATGGCT CTAATTCTCA TTCCAGTATG CCGAAGAACT CTTACTCAGA TTAGAGAAAG TTTCCTTGGT TATATTATAC CTTTTGATGA TAACATCAAT TTTCATAAAA TGGTTGCCGT AGGAATTACT GTAGGGGCCT TTATTCATAT ATTGTTTCAC ACAAGTTGCA ACTTCGTAAA GTTAGCGTCC TGTCCAGAGA GTAAATTTAT GACAGCTCTT GGAAGCAATT TTGGCTACCA GCAACCAACT TACATGGATC TAGTAGTATC TGTTCCAGGC GTAACGGGGA TACTAATGAC CCTTTTCATG CTTTTCTCCT TCACACTGGC AACACATTCG TTCCGAAGAA ATATCATCAA ATTGCCTGGC TCATTTCATC ATTTGGCTGG ATTTAATGCA TTTTGGTATG CACATCATCT GCTGATATTT GTGTACGTGC TCTTGATCCT CCACGGCTGC TTCATATTCC TTACCAACGA ATGGTACAAA AAGACGGTAT GTCCACTTGC ATTTTGATAA CCTTATCACA CTTGTTAACC TGGTATTGAA AGAAGTACTA GTTCAATTAT GCACACAAAT CATATCGTTG TCCAAATGTT GAGAAAAATG TAGCATGAAT ATAAGCTCTA TACTCTTGAT ATCTAGTTCA ATGTTTCTTC AAATTAGTTA AAGAATTTTC TATCGAAAAG TCATGATTGA ATGAGCAAAA ATACCTTTAA TATGCAGACA TGGATGTATC TTGCAGTCCC AGTAGTTCTG TATTCTACAG AAAGAGTTCT TATCATCAAT GAGAACCGCT ACCACGTGAA CATACAAAAG GTTTTAGTTC CAAGAGACTT ATATCAATTC AAGAAAAACT CTTAGTAATT GCAAAATTTC TAAATTCAGC TTCATTTCTG TGTTGTAAAA CAAAAAATGC AGGCTGTTAT ATATGCAGGG AATGTACTAG CACTATATAT GACTAAACCT CCAGGATTCA AGTACAAGAG CGGAATGTAC CTGTTCGTTA AATGTCCAGA TATATCAAAC TTCGAATGGT AATTAAAGCA CAAATTCTAA TCAAACATAT TCAATATTGT CAATATCCTT GTGCTAAGAA ATTTCTATTC GTCTCTTACA GGCATCCATT CTCAATCACT TCTGCACCAG ATGAGGACTA TCTAAGTGTC CACATACGTA CATTAGGAGA CTGGACTACA GAGCTTAGAA CCAGATTCGA AAAGGTATTA TACTATGCTA ATTTTCATTT CTTAAAACAA CTTTACTCTT CATTTTCTGT GGTGTACAAA ACTTGACCGA GTAAAGAAAG GTATCCAGCC ATATCGTTGA CGGTTTGACA CATAATTATC ACATAGTAGG CAGATATGTA TTTTATGTCA GGTACTTCTT GCAATGTCTT TGTGTAGGAT AGTAGGAGAC AATTTACTAA GGCATGATTC GTAAAATCAA GATACATAAT TCGCTGAAAT GAATAAGGAA TTTAAAAGGT TTTTTATTCC TATTGTTCTT TGCTCTTGGG ATCCTAAAGC TCGCATTTAC AGGCATGTCA AGAGGCACCA TCCAAGACGA GAAATCTTGT TAGAATGGAA ACTAAAGCGT ATAATCAGAA GGATGCGGAA CAATCTCAAG CCGAGTATGC TACAATTATC TATTGCTAAT AGTATCCATC TTATGTTGCT TTGAAACTTA TATCTTAAAT TTTGAATCAG AAATCCAATG ATCATTATCA AAGGGCCTTA TGGTGCACCA GCTCAGAACT ACAAGAAGTA TGATATCCTT CTACTAGTTG GCTTAGGAAT TGGAGCAACT CCATTTATCA GCATTATAAA GGACATACTA AACCAGAAAT CGGGATATGT AAGAGCTTAA CCATATAGAA GTATTTTGTT AATAACAACA GCAGAGACAA AAGAAAATAT AACATAATCC AACAACTGCA GAATCAACAA GATGACGGCA AGAAAGGTCC TCAAAGAGCA TATTTCTATT GGGTGACACG AGAACAAGGA TCATTCGACT GGTTCAAGGG TGTAATGGAT GACATTGCTG AACACGACGA AAATGTTGGT TTTTGAACCC TGAGATTATG AATAAGTAGT TTCCTCAATT AGCATAAACT CGGACTAATA CACTTTTCAT GCTCATGAAA CTTTAATATT CTCCTGCAGG AAGTGATAGA AATGCACAAC TACTTGACTA GTGTTTATGA AGAAGGGGAC GCACGATCAG CACTAATCAC AATGGTCCAA TCACTGCAAC ATGCTAAAAA TGGAGTTGAT GTTGTCTCAG AAAGCCGGGT ATTTTGTTAA GATCTAATGA TCACTACACT ACTAGCTTCA ACTTTTTTAT TAGAACTGTT CTAACACTTG ATTCTCCGAC AGATAAGAAC ACATTTCTCT AGACCAAATT GGAAAAGAGT GTTTGCTCAA TTAGCTGTTA CACATCCATC ATCTCGCATT GGTAAGCCTC TATTTTTGAA CTACTTCAAG GTTGATTTCA CGGATGGACA CTCAACTACT GTATCATTCA GTCTATAAAA ACATGTTTAA AACATCACGA TATATTGCAC AGGTGTTTTT TACTGTGGAA GTCCAACACT TACCAAACCA CTCAAAAAGT TGTGTCAAGA ATTTAGCTTA AATTCGTCCA
CGCGCTTCAA CTTCCACAAA GAGAACTTCT AG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA