Entry information : SaPrx05
Entry ID 15972
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-27 (Christophe Dunand)
Peroxidase information: SaPrx05
Name SaPrx05
Class Class III peroxidase    [Orthogroup: Prx026]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx05
start..stop
S start..stop
SaPrx48 543 0 1..319 1..314
MguPrx56 482 8e-174 18..319 4..305
CroPrx09 482 2e-173 3..319 1..321
InPrx04 476 3e-171 5..318 9..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3038227..3038436 210 N° 2 3037941..3038129 189 N° 3 3037673..3037835 163 N° 4 3037000..3037397 398
complement(join(3037000..3037397,3037673..3037835,3037941..3038129,3038227..3038 436))


exon

Literature and cross-references SaPrx05
Protein ref. GenBank:   GER27953.1
Protein sequence: SaPrx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319
PWM (Da):   %s   34712.36  
PI (pH):   %s   7.68
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKMAILNVLP LILLASTMAS VANGLNMNYY ILACPIADII IKNTVISALQ SDPTLSGPLL RMHFHDCFVE GCDGSILIDS TKNNTAEKDS PANLSLRGYK IIDAAKDALE KQCPGVVSCA  DILAMAARDA VFFAGGPYYD IPKGRKDGLR SKIEDTIRLP PPSLNSTELI NMFAQRGFTA REMVALSGAH TLGVARCSSF KSRLSSTNPN RDVDPTIDAQ FAKTLSATCS KGDDAEQPFD 
STRTKFDNDY YRALQRSVGL LFSDETLYMG PTTRAFVNGY AMNPAMFFFD FQRAMVKMGT LDVKEGSNGE IRGNCRRVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGATGG CCATTCTCAA TGTGTTGCCT TTGATACTTT TGGCCAGCAC GATGGCTAGC GTGGCCAACG GCTTGAACAT GAACTACTAC ATATTGGCGT GTCCAATTGC AGATATCATC  ATAAAGAACA CCGTGATTAG TGCCTTGCAA TCCGACCCGA CCCTTTCTGG GCCACTCCTT CGTATGCACT TTCACGACTG TTTTGTCGAG GGATGTGATG GATCTATATT GATCGACTCG  ACTAAAAATA ACACAGCGGA AAAGGACTCG CCCGCCAATC TAAGCCTAAG GGGATACAAA ATAATTGATG CCGCTAAAGA CGCGCTTGAA AAACAGTGCC CTGGAGTAGT TTCTTGTGCC  GATATTCTGG CCATGGCCGC TAGAGATGCT GTTTTCTTCG CGGGAGGTCC GTATTATGAT ATACCGAAAG GTAGGAAAGA CGGTCTAAGA TCGAAGATTG AGGACACGAT TCGATTGCCG  CCACCGAGCT TAAACAGTAC GGAGCTGATC AACATGTTTG CCCAGCGTGG CTTCACAGCT AGAGAAATGG TCGCTTTATC CGGGGCCCAC ACGCTGGGGG TGGCCAGGTG CTCGTCGTTC  AAGAGCCGAC TGAGCAGCAC CAACCCAAAC CGAGACGTGG ACCCCACCAT CGACGCACAG TTTGCAAAGA CGTTGTCTGC CACCTGCAGC AAGGGTGATG ACGCAGAGCA GCCATTCGAC  TCCACAAGGA CTAAGTTCGA CAACGACTAC TACAGAGCCC TGCAGAGAAG TGTCGGACTC CTGTTCTCTG ACGAGACGCT ATATATGGGC CCCACCACAC GGGCTTTCGT AAACGGGTAC  GCGATGAACC CAGCCATGTT CTTCTTTGAC TTCCAACGAG CCATGGTGAA GATGGGGACG TTGGACGTCA AGGAAGGGTC CAACGGTGAA ATCAGGGGCA ATTGCAGACG GGTCAACTAA 

Retrieve as FASTA