Entry information : SaPrx06
Entry ID 15973
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-29 (Christophe Dunand)
Peroxidase information: SaPrx06
Name SaPrx06
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx06
start..stop
S start..stop
GmPrx41 484 2e-171 202..504 25..327
MePrx06 483 8e-171 202..504 28..330
GmPrx236 482 2e-170 202..504 27..329
MguPrx42 477 3e-168 203..502 23..322
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 874751..874836 86 N° 2 874121..874638 518 N° 3 871451..871599 149 N° 4 871132..871320 189
N° 5 870816..870981 166 N° 6 869708..870114 407  
complement(join(869708..870114,870816..870981,871132..871320,871451..871599,8741 21..874638,874751..874836))


exon

Literature and cross-references SaPrx06
Protein ref. GenPept:   GER28694.1
Protein sequence: SaPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   504
PWM (Da):   %s   56321.3  
PI (pH):   %s   6.51
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLKDKWVEMG DAADWKRGLQ KIVDRDYHLA LVERAMRAWN DFQTANPRKK DLGRLIKLAQ GNEDSEEEEP EIGVGQLSMA ISTHISAQGN VGFGCVLRKQ EQIIKTWAKT DTTEGDAEIT  HLRGIKWGLT LAKEGGWIRC VCMVKCKDLL QKLISSTGFS PHAMAQCQDI CNINSSDVFI SFVFGDRLCT LSAKLACEAV RGKSELELNY YNQSCPKAEQ IIKEQVEQLY KKHGNTAASW  LRNLFHDCAL ISCDASLLLD NANDIISEKS EPRSFGMRNF KYINTIKEAL EKECPMTVSC ADIIALSARD GVALLGGPSI DVKTGRRDST ESYASEVDNY IPNHNDSMSL VLSTFEKIGV  DTEGLVALLG AHSVGRTHCQ NIVQRLYPTV DSTLDSSYAK YLKRRCPTST PNPKAVEYVR NDLGTPMILD NVYYKNILAH KGVLLVDQEL VSDPRTSPFV NKMAQNNEYF LQQFSRAFLI 
LSENNPLTKD EGEIRRDCRF VNSN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Very long PS including an large intron
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTGAAAG ATAAGTGGGT AGAAATGGGA GATGCTGCAG ACTGGAAAAG GGGACTTCAG AAAATAGTGG ATAGAGATTA TCACTTAGCT TTGGTTGAGA GAGCAATGAG GGCATGGAAT  GACTTTCAGA CAGCTAATCC AAGGAAGAAA GATCTGGGCA GATTGATCAA ATTGGCTCAA GGGAATGAGG ACAGTGAAGA GGAGGAACCG GAAATTGGAG TAGGACAGCT ATCTATGGCT  ATCAGTACTC ACATCTCAGC TCAGGGTAAT GTAGGGTTTG GGTGTGTGCT TAGAAAACAA GAGCAGATCA TCAAAACTTG GGCCAAGACT GATACAACCG AGGGGGATGC TGAAATTACT  CACTTGAGAG GCATTAAATG GGGACTGACT CTGGCCAAAG AGGGAGGATG GATTAGATGC GTGTGCATGG TGAAGTGCAA GGACTTACTG CAAAAATTAA TATCGAGCAC GGGTTTTTCT  CCACATGCTA TGGCACAGTG TCAAGACATT TGTAATATTA ACTCTAGTGA TGTTTTTATT TCCTTTGTTT TTGGTGATAG ACTATGTACT CTTAGTGCTA AGCTTGCATG TGAAGCAGTT  AGGGGAAAAA GTGAGCTTGA GTTGAATTAC TACAACCAAA GCTGCCCCAA AGCAGAACAA ATAATCAAGG AACAAGTTGA ACAACTGTAC AAAAAACATG GAAACACAGC AGCTTCATGG  CTTAGAAATC TCTTCCATGA TTGTGCTCTC ATATCGTGCG ATGCATCCTT ACTGCTCGAC AATGCAAACG ACATAATTTC CGAGAAATCG GAGCCGAGGA GTTTTGGTAT GAGAAATTTT  AAGTACATAA ACACAATCAA AGAGGCTCTT GAGAAGGAAT GTCCCATGAC TGTTTCTTGT GCTGATATTA TTGCCCTCTC AGCAAGAGAT GGGGTGGCTT TGTTGGGAGG GCCATCGATT  GATGTGAAGA CCGGTCGAAG AGATAGTACG GAAAGCTACG CATCGGAAGT TGATAATTAC ATCCCTAATC ACAATGATAG CATGTCATTA GTGCTAAGCA CGTTTGAAAA GATTGGTGTT  GATACAGAAG GTCTTGTTGC TCTATTAGGT GCACACTCGG TTGGACGAAC TCACTGCCAG AACATAGTCC AAAGACTATA CCCTACTGTG GACTCGACTT TGGACTCGAG CTATGCCAAG  TACCTCAAGA GACGATGCCC GACATCAACC CCAAACCCGA AAGCGGTCGA GTACGTGAGG AACGACCTTG GGACGCCGAT GATTTTGGAC AACGTTTACT ACAAGAACAT ACTGGCCCAT  AAAGGGGTCC TGCTGGTGGA CCAGGAGCTG GTGTCCGACC CAAGAACGAG CCCATTTGTG AACAAGATGG CCCAAAATAA CGAATATTTT CTTCAGCAGT TTTCGCGGGC TTTCTTGATT 
TTGTCCGAAA ATAATCCGCT GACGAAGGAT GAGGGCGAGA TCAGAAGGGA CTGCCGATTT GTGAACTCTA ATTGA 

Retrieve as FASTA