Entry information : SaPrx07
Entry ID 15974
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-29 (Christophe Dunand)
Peroxidase information: SaPrx07
Name SaPrx07
Class Class III peroxidase    [Orthogroup: Prx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx07
start..stop
S start..stop
SaPrx[P]58 493 2e-177 5..331 1..327
SaPrx58 438 1e-155 5..331 5..336
MguPrx17 428 9e-152 10..331 12..335
CcampPrx70 426 5e-151 10..331 19..342
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 939646..939864 219 N° 2 939973..940170 198 N° 3 940316..940481 166 N° 4 941051..941463 413
join(939646..939864,939973..940170,940316..940481,941051..941463)


exon

Literature and cross-references SaPrx07
Protein ref. GenBank:   GER29753.1
Protein sequence: SaPrx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331
PWM (Da):   %s   35270.29  
PI (pH):   %s   5.23
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSTSSSFLPI VTVTTIFFIL PFISEAQLST TFYSTSCPNV TNIVSTQLSQ ALSSDPRIGA SLIRLHFHDC FVQGCDGSVL LDDNTTNSIQ SEKNAGPNAN SARGFDVVDN IKAALEQACP  GVVSCADILA LASQAAISLA GGPSWVVPCG RTDSRTANMA LANTAIPSSF DTVTNITAKF ANVSLNTNDF VALSGAHTFG RAECRFFFHR LYNFSGTGQP DPTLNTSYLA MLRQVCPQNL 
ANLTSVVTDL DPSSRDSFDT GYYSNLLTGQ GLLQSDQELF SNSSAQIRGL VQQFSSNRNA FFQSFVASMV KMGNIVSGQS GEIRANCRMI N 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCACTT CTTCTTCATT CTTACCTATA GTAACTGTCA CAACCATTTT TTTCATACTT CCTTTTATAT CAGAAGCTCA GCTAAGCACC ACATTTTACT CCACTAGCTG CCCCAACGTG  ACGAATATTG TTTCTACTCA ACTCAGTCAA GCTTTATCCA GCGATCCGCG CATTGGCGCT AGCCTCATTC GCCTCCATTT CCACGATTGC TTCGTTCAGG GATGTGATGG ATCGGTGTTA  TTGGACGACA ACACGACGAA TTCAATACAG AGCGAGAAAA ACGCGGGTCC GAATGCGAAC TCGGCTCGTG GATTTGATGT TGTGGACAAT ATAAAGGCGG CTCTCGAGCA GGCGTGCCCT  GGCGTCGTGT CGTGTGCCGA CATTCTTGCG CTTGCTTCTC AAGCTGCCAT ATCTCTAGCG GGAGGTCCAT CGTGGGTTGT GCCGTGCGGC AGGACAGACA GCAGAACGGC GAACATGGCA  TTAGCGAACA CGGCTATTCC GTCGTCGTTC GATACCGTAA CTAACATCAC TGCTAAGTTT GCTAACGTTA GTCTCAACAC TAACGACTTT GTCGCATTAT CAGGGGCCCA CACGTTCGGT  CGGGCAGAAT GCAGGTTCTT CTTCCACCGG CTGTACAATT TCAGCGGGAC GGGACAGCCG GACCCGACTC TGAACACGTC CTACCTGGCA ATGCTAAGGC AAGTTTGCCC GCAAAACTTG  GCCAACTTGA CGTCGGTGGT GACGGACTTG GACCCATCGA GCCGGGACAG TTTCGACACC GGGTATTATT CGAACCTTTT AACGGGTCAG GGGCTACTGC AGTCGGATCA AGAGTTGTTC  TCGAATTCGA GCGCGCAGAT AAGAGGGCTT GTGCAGCAGT TTAGCAGCAA TAGGAATGCA TTTTTCCAGA GCTTTGTGGC GTCTATGGTG AAGATGGGGA ATATTGTGTC GGGGCAGAGC 
GGGGAAATCA GGGCAAATTG CAGGATGATT AATTGA 

Retrieve as FASTA