Entry information : SaPrx13
Entry ID 15980
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-30 (Christophe Dunand)
Peroxidase information: SaPrx13
Name SaPrx13
Class Class III peroxidase    [Orthogroup: Prx016]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx13
start..stop
S start..stop
MguPrx49 513 0 1..324 1..316
GhPrx23 482 2e-173 1..324 1..317
PpePrx30 478 8e-172 9..324 8..318
GmPrx88 476 4e-171 3..324 1..317
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1616078..1616290 213 N° 2 1615762..1615972 211 N° 3 1611181..1611336 156 N° 4 1609901..1610295 395
complement(join(1609901..1610295,1611181..1611336,1615762..1615972,1616078..1616 290))


exon

Literature and cross-references SaPrx13
Protein ref. GenBank:   GER34096.1
Protein sequence: SaPrx13
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324
PWM (Da):   %s   35109.81  
PI (pH):   %s   9.1
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MALVVTTILW SVITILSSIC SVGFGLSWNY YDKSCANVES IVAKAVKDAT ANDKTVPAAL LRLHFHDCFI RGCDGSVLLE SRGGKKAERE GAPNQYLHAF YVIENAKRAV EAVCPGIVSC  ADILAFAARD SVVLVSNSFP IRPTWNVPKG RKDGRTSEAT DTAQLPSPTF NISQLQQSFA LRGLSLHDLV ALTGGHTLGF SHCSSFENRI YNFNSTHDTD PSMHPSFAAS LKGICPVNNK 
AKNAGTSMDP SPTTFDNTHY KLILHGKTLF SSDQALLTTP QTKSLVYKFA TSKKAFHTAF AKSMIKMSSI NGGQEVRKDC RFIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTTGG TTGTGACAAC AATACTGTGG TCGGTGATCA CAATTTTATC ATCAATTTGT TCAGTAGGGT TTGGTCTGAG TTGGAATTAT TATGACAAAA GTTGTGCGAA TGTTGAGAGT  ATAGTAGCCA AAGCCGTTAA GGATGCTACT GCAAATGACA AAACCGTACC CGCCGCACTT CTCAGGTTGC ACTTTCATGA TTGCTTTATC AGAGGTTGTG ATGGTTCGGT GTTATTGGAG  TCGAGAGGTG GAAAGAAAGC GGAAAGGGAA GGAGCTCCGA ACCAATATCT CCATGCATTT TATGTGATAG AAAATGCTAA GAGAGCTGTT GAAGCTGTCT GTCCCGGCAT TGTGTCGTGT  GCTGATATAT TGGCCTTTGC TGCTAGAGAT TCTGTCGTTT TAGTAAGCAA TTCCTTTCCA ATACGACCCA CATGGAATGT TCCAAAAGGA AGGAAGGATG GAAGGACATC AGAAGCCACT  GACACTGCTC AGTTGCCATC TCCCACATTC AACATTTCTC AGCTCCAACA AAGCTTTGCT CTAAGAGGCC TCTCCTTACA TGACCTCGTT GCTCTTACAG GTGGGCATAC TCTAGGGTTC  TCACACTGTT CATCATTCGA AAATAGAATC TACAACTTTA ACTCGACCCA TGACACGGAC CCGAGCATGC ACCCATCTTT TGCGGCGAGC CTAAAAGGCA TTTGCCCCGT CAATAACAAG  GCCAAGAATG CGGGCACCTC CATGGATCCT TCTCCTACAA CCTTCGACAA TACCCACTAT AAACTCATAC TCCATGGTAA AACTCTCTTC TCTTCTGACC AAGCTCTTCT CACCACGCCA  CAAACAAAAA GTTTAGTCTA TAAGTTTGCT ACCTCCAAAA AAGCTTTCCA CACCGCATTT GCCAAGTCCA TGATCAAGAT GAGCAGCATC AATGGAGGAC AAGAGGTCAG AAAGGATTGT 
AGGTTTATAA ACTGA 

Retrieve as FASTA