Entry information : SaPrx17
Entry ID 15984
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-30 (Christophe Dunand)
Peroxidase information: SaPrx17
Name SaPrx17
Class Class III peroxidase    [Orthogroup: Prx067]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx17
start..stop
S start..stop
SaPrx03 552 0 1..319 1..319
MguPrx45 485 1e-174 1..319 1..320
CpapPrx26 477 2e-171 1..318 5..321
LePrx41 471 4e-169 7..319 6..314
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 156097..156303 207 N° 2 155777..155965 189 N° 3 155420..155582 163 N° 4 154903..155303 401
complement(join(154903..155303,155420..155582,155777..155965,156097..156303))


exon

Literature and cross-references SaPrx17
Protein ref. GenBank:   GER40850.1
Protein sequence: SaPrx17
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319
PWM (Da):   %s   34605.18  
PI (pH):   %s   7.99
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAALLIFLV TIVLSSNFYS SNALDVDYYQ KTCPLAEFTI TETVKQAMTT EKTVAAALLR MHFHDCFIRG CDASVLLNSK GNNQAEKDGP PNISLHAFYV IDDAKKAIEK MCPGVVSCAD  ILALAARDAV TLSGGPTWDV PKGRTDGRIS NASDTRQLPA PTFNISQSQQ SFSQRGLSMD DLVALSGGHT LGFSHCSSFK NRIYNFSDTA DVDPSLDPSF AAQLRQECPF RTTNKNAGAD 
LDSSPFLFDN TYYKMILKGK SIFSSDQALL TNSRTRALVM KFASSQGKFY EAFAKSMVKM SSISTGSGSE IRRDCKVVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAGCAG CACTCCTAAT TTTTCTAGTG ACTATTGTTC TCTCTTCAAA TTTTTATTCT TCAAATGCAC TAGATGTAGA TTACTACCAA AAAACATGCC CGTTGGCCGA GTTCACCATC  ACAGAAACCG TTAAGCAAGC CATGACAACT GAGAAAACAG TTGCAGCCGC CCTACTTAGG ATGCACTTCC ACGACTGCTT TATTAGAGGT TGTGACGCTT CCGTGCTGCT GAATAGCAAG  GGAAACAACC AAGCAGAGAA GGATGGACCT CCAAATATTT CTTTACATGC ATTTTACGTG ATCGATGATG CCAAGAAGGC AATCGAGAAA ATGTGCCCCG GTGTTGTCTC GTGTGCTGAC  ATTTTGGCTC TTGCTGCAAG AGATGCCGTG ACACTTTCCG GAGGTCCCAC ATGGGATGTA CCAAAAGGGA GGACAGACGG AAGGATTTCA AACGCATCAG ACACTCGCCA ATTGCCTGCA  CCGACTTTCA ACATATCTCA GTCGCAACAG AGCTTCTCAC AAAGAGGCCT TTCTATGGAT GACTTAGTGG CACTCTCAGG CGGGCACACA CTCGGTTTCT CCCATTGTTC GTCCTTCAAA  AACAGAATCT ACAACTTCAG CGACACAGCT GACGTGGACC CATCCTTGGA CCCGTCATTT GCGGCCCAGC TAAGGCAGGA GTGTCCCTTT CGGACCACGA ACAAGAATGC TGGGGCTGAC  TTGGACTCGT CTCCGTTTCT GTTCGACAAC ACCTACTACA AAATGATACT CAAAGGGAAG AGCATTTTTT CCTCTGATCA GGCCCTGCTT ACTAATTCAA GGACTAGGGC ATTGGTCATG  AAATTCGCAT CCTCTCAAGG TAAGTTTTAT GAGGCGTTTG CAAAGTCGAT GGTCAAGATG AGTAGCATTA GTACTGGGAG TGGGAGTGAG ATTAGGCGGG ATTGTAAGGT TGTTAATTAA 

Retrieve as FASTA