Entry information : SaPrx[P]18
Entry ID 15985
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2019-11-30 (Christophe Dunand)
Peroxidase information: SaPrx[P]18
Name SaPrx[P]18
Class Class III peroxidase    [Orthogroup: Prx200]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx[P]18
start..stop
S start..stop
SaPrx25 238 8e-83 1..121 1..121
SaPrx24 228 1e-78 1..121 1..121
MguPrx35 147 7e-45 1..121 1..119
AmajPrx09 144 3e-44 8..121 13..123
Literature and cross-references SaPrx[P]18
Protein ref. GenBank:   GER41487.1
Protein sequence: SaPrx[P]18
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   136
PWM (Da):   %s   14957.81  
PI (pH):   %s   9.94
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSYKLLKTLV SIFVLSIHTF EPSEAQLKAN FYRSSCAFAE VDVRKAVAQA IMKDQGIAVG LIRLHFHDCF VRGCDASVLI DSTPSNNAEK SAPLNNPSIR GFKVIDNAKN VLQSMCKGIF 
STISHIISKL RHQKEN 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Exons 3 and 4 are missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGTTATA AGCTGCTTAA AACTCTTGTT TCAATATTTG TTTTGTCTAT TCACACTTTT GAACCATCAG AAGCTCAATT GAAGGCAAAC TTCTATCGAA GTTCTTGTGC ATTTGCTGAG  GTTGATGTGA GAAAGGCAGT TGCACAAGCA ATTATGAAGG ACCAAGGGAT TGCAGTTGGA CTTATAAGGT TGCATTTTCA TGATTGTTTT GTGAGGGGTT GTGATGCTTC GGTTCTCATA  GACTCAACTC CATCTAACAA TGCCGAGAAA TCCGCACCAC TGAATAACCC GAGCATTAGA GGTTTCAAAG TTATAGACAA TGCGAAAAAC GTGCTTCAAT CCATGTGCAA AGGCATTTTC 
TCAACAATTT CACACATCAT TTCGAAGCTG AGACATCAAA AAGAAAATTA A 

Retrieve as FASTA