Entry information : SaPrx19
Entry ID 15986
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-11-30 (Christophe Dunand)
Peroxidase information: SaPrx19
Name SaPrx19
Class Class III peroxidase    [Orthogroup: Prx018]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx19
start..stop
S start..stop
MguPrx25 518 0 27..331 15..319
NtPrx08-1B 505 0 17..335 6..324
PtPrx59 492 5e-177 13..331 1..320
InPrx03 491 1e-176 19..335 8..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 60043..60282 240 N° 2 59737..59928 192 N° 3 58321..58914 594  
complement(join(58321..58914,59737..59928,60043..60282))


exon

Literature and cross-references SaPrx19
Protein ref. GenBank:   GER42824.1
Protein sequence: SaPrx19
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   341
PWM (Da):   %s   37522.77  
PI (pH):   %s   4.52
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTHIHSTLLE KSMAPFFPFF LLLLSAVSAS PPAALRPGFY SETCPEAEAI ARDVLRQAMA REIRSAASVM RLQFHDCLVN GCDGSLLLDD TPNMLGEKLA LSNIDSLRSY EVIDEIKEAL  ERTCPGIVSC ADIIIMAARD AVLLSGGPHW EVKLGRLDSL TASQEASNDI MPSPRADAAS LTALFAKFNL STKDLVALSG SHSIGKARCF SVVFRLYNQS GSGQPDPTID PQFREELDKL 
CPQGGDEEVT GNLDATPERF DNRYFRDLVE GRGFLNSDQT LFTTLETREF VRVFSRDEGE FFEAFVEGMI KLGDLQSRWP GEIRRDCRVV NDDGPLLLAQ R 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACGCATA TCCACAGTAC ACTACTCGAG AAAAGTATGG CCCCCTTCTT TCCCTTCTTC CTCCTCCTCC TCTCCGCCGT CTCCGCCTCG CCGCCGGCGG CCCTCCGCCC TGGTTTCTAC  TCGGAGACCT GCCCGGAGGC GGAGGCCATC GCGCGGGACG TCCTCAGGCA GGCCATGGCC AGAGAAATTA GAAGCGCTGC CTCTGTTATG CGCCTACAGT TCCATGATTG TCTAGTTAAT  GGTTGTGATG GGTCATTGTT ACTGGATGAC ACGCCGAACA TGCTTGGAGA GAAATTGGCT TTGTCGAACA TAGATTCGCT GAGATCCTAC GAAGTGATCG ATGAGATTAA GGAAGCATTG  GAGAGGACGT GTCCTGGAAT CGTCTCTTGT GCCGATATCA TCATCATGGC TGCTAGAGAT GCTGTTCTTC TGAGTGGGGG CCCACACTGG GAAGTGAAAT TGGGCCGACT GGACAGCCTA  ACCGCCAGCC AAGAGGCCTC GAACGACATA ATGCCAAGCC CAAGAGCCGA CGCTGCCTCC CTCACAGCCC TCTTCGCCAA ATTCAACCTC TCGACAAAAG ACCTCGTTGC CCTCTCCGGG  TCCCACTCCA TCGGCAAGGC AAGATGCTTC TCTGTAGTCT TCAGGCTCTA CAACCAGTCG GGCTCGGGCC AGCCCGACCC AACCATCGAC CCGCAATTCC GTGAAGAGCT CGACAAGCTC  TGTCCGCAGG GTGGGGATGA AGAGGTCACG GGCAATCTTG ACGCGACTCC CGAGAGATTT GACAATCGTT ACTTTAGGGA TTTGGTGGAG GGAAGGGGTT TTCTCAACTC GGATCAGACG  CTTTTCACGA CTCTTGAGAC GAGGGAGTTT GTGAGGGTGT TTAGTCGAGA TGAGGGCGAG TTTTTTGAGG CGTTTGTGGA AGGGATGATT AAGTTGGGGG ATTTGCAGTC CAGGTGGCCG 
GGTGAGATTA GGAGGGATTG TAGGGTGGTT AATGATGATG GGCCGTTGTT GCTGGCCCAA CGTTAG 

Retrieve as FASTA