Entry information : SaPrx26
Entry ID 15993
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-03 (Christophe Dunand)
Peroxidase information: SaPrx26
Name SaPrx26
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx26
start..stop
S start..stop
CsPrx10 579 0 6..331 5..330
CclPrx35 578 0 6..331 5..330
RcPrx17 572 0 8..332 7..331
PbPrx02 568 0 5..332 6..333
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1383241..1383468 228 N° 2 1382698..1382889 192 N° 3 1382436..1382601 166 N° 4 1381836..1382248 413
complement(join(1381836..1382248,1382436..1382601,1382698..1382889,1383241..1383 468))


exon

Literature and cross-references SaPrx26
Protein ref. GenBank:   GER49024.1
Protein sequence: SaPrx26
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332
PWM (Da):   %s   36401.56  
PI (pH):   %s   9.63
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKSTFILFL ALTLLAFAPF CFCHNTHGGH LYPQFYDRSC PRARDIVQSI VAKAVAKEAR MAASLVRLHF HDCFVKGCDA SILLDSTGSL VSEKRSNPNR NSVRGFEVID DIKTALEKEC  PHTVSCADIM ALAARDSTVL AGGPSWEVPL GRRDSKGASL SGSNNNIPAP NNTFQTILTK FKLQGLGIVD LVALSGSHTI GNARCVSFRQ RLYNQSGNSK PDFTLDQSYA SKLRAGCPRS 
GGDQNLFFLD PSSPTKFDNS YFKNLLSNKG LLSSDQILVT KNRQSLELVK KYAENIDLFF QQFAESMVKM GNISPLTGNR GEIRKNCRRI NA 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTAAGT CCACATTCAT CTTGTTCTTG GCTTTAACTC TTCTTGCTTT TGCACCCTTT TGCTTTTGTC ACAACACACA TGGAGGCCAC TTATACCCAC AATTCTATGA CCGTTCGTGC  CCAAGGGCTC GTGACATTGT TCAGTCCATT GTTGCAAAGG CGGTTGCTAA AGAAGCTCGT ATGGCGGCTT CACTTGTTAG GCTCCATTTC CACGACTGCT TTGTTAAGGG CTGTGATGCG  TCGATACTAT TGGACAGCAC GGGTAGCCTA GTCAGCGAAA AGAGGTCCAA TCCTAACCGA AACTCAGTCC GCGGGTTTGA AGTGATTGAC GATATCAAAA CGGCACTTGA GAAAGAATGC  CCTCACACCG TGTCTTGTGC CGATATCATG GCTCTTGCTG CAAGGGACTC TACAGTTCTT GCTGGTGGGC CCAGTTGGGA GGTTCCACTG GGAAGAAGAG ACTCAAAAGG AGCCAGCTTG  AGTGGCTCAA ACAACAACAT TCCTGCTCCA AACAACACCT TTCAGACCAT CTTAACTAAA TTTAAGCTAC AAGGATTGGG CATTGTTGAT CTTGTTGCAT TATCTGGAAG CCACACCATA  GGAAATGCTA GATGTGTGAG CTTCAGGCAG AGGCTCTACA ACCAATCAGG AAACTCGAAA CCCGATTTCA CCCTCGACCA ATCATATGCC TCCAAGTTGC GGGCCGGGTG CCCGAGATCT  GGTGGGGACC AGAACCTTTT CTTCTTAGAC CCTTCTTCTC CTACGAAATT CGACAACAGT TATTTCAAGA ATCTGTTGAG TAATAAGGGC CTTTTGAGTT CTGACCAAAT TCTGGTCACT  AAGAATCGAC AGTCGCTTGA GCTCGTGAAG AAATATGCCG AGAATATCGA CCTTTTCTTT CAGCAGTTTG CAGAGTCTAT GGTTAAGATG GGGAATATTT CGCCGTTGAC CGGAAACAGG 
GGAGAAATCA GAAAGAACTG CCGAAGGATT AATGCCTAA 

Retrieve as FASTA