Entry information : SaPrx30
Entry ID 15997
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-03 (Christophe Dunand)
Peroxidase information: SaPrx30
Name SaPrx30
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx30
start..stop
S start..stop
MguPrx32 509 0 1..324 1..330
CanPrx01 498 1e-179 12..324 20..332
StPrx28 492 3e-177 12..324 19..331
GhPrx06 492 3e-177 12..324 15..328
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 247648..248040 393 N° 2 248117..248279 163 N° 3 248349..248767 419  
join(247648..248040,248117..248279,248349..248767)


exon

Literature and cross-references SaPrx30
Protein ref. GenBank:   GER55517.1
Protein sequence: SaPrx30
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324
PWM (Da):   %s   34908.58  
PI (pH):   %s   8.15
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKIHNLYYQL WIVLACLVSM SNGQGTRVGF YSRTCPRAES IVQSTVRSHF SSNRAIGPGL VRMHFHDCFV HGCDGSILIS GPSTERTAGP NLLLRGYEVI DDAKQQLEAL CPRIVSCADI  LALAARDSVV LAGGVGWAVP TGRRDGRVSL ASDASNLPGF TDTVDVQIQK FQDKGLNTQD LVALVGGHTI GTSACQFFRY RLYSFTSNGG PDPSIDPSFL PTLRNLCPEG GNGSVRVGLD 
NGSENRFDNS YFANLRAGRG VLESDQRLWA DNSTRTVVQR FLGVRGLLGL TFGVEFGRSM VKMSNVEVKT GTDGEIRTVC SAVN 

Retrieve as FASTA  
Remarks Complete seuqence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGATCC ATAACTTGTA TTATCAGCTA TGGATCGTGC TAGCATGTCT AGTGTCTATG TCAAATGGAC AGGGCACGAG GGTCGGTTTC TACTCCCGAA CCTGCCCACG GGCCGAATCC  ATAGTTCAAT CCACCGTCAG GTCGCATTTC AGTTCAAACC GGGCAATCGG GCCCGGTTTG GTGAGGATGC ACTTTCACGA CTGCTTTGTC CATGGCTGTG ACGGGTCAAT ACTCATCAGT  GGCCCATCCA CCGAAAGGAC TGCGGGCCCC AATCTTCTGC TCAGAGGGTA CGAGGTCATA GACGATGCCA AGCAACAGCT GGAGGCTTTG TGCCCCAGGA TTGTCTCTTG TGCGGACATT  CTTGCCCTTG CCGCCCGTGA TTCTGTCGTG CTTGCTGGAG GAGTCGGGTG GGCCGTCCCG ACAGGTCGTC GAGATGGTCG GGTCTCATTG GCGAGCGATG CTTCAAACTT ACCAGGCTTC  ACGGACACCG TAGATGTCCA GATCCAAAAG TTCCAAGACA AAGGTCTCAA CACCCAGGAT CTTGTCGCGC TTGTTGGGGG TCACACGATC GGAACCTCGG CCTGCCAGTT CTTCCGCTAC  AGGCTGTACA GCTTCACGTC AAACGGAGGG CCCGACCCGT CCATCGACCC GAGTTTTCTC CCTACGCTCC GAAACCTCTG CCCGGAAGGC GGGAACGGGT CAGTCCGGGT CGGGCTCGAC  AACGGGAGCG AGAACCGGTT CGACAATTCG TACTTCGCGA ACCTGAGGGC TGGGCGTGGG GTCCTCGAGT CGGACCAGAG GCTTTGGGCG GATAACTCGA CCCGGACCGT GGTCCAGCGG  TTTCTTGGAG TCAGGGGTTT GCTGGGACTG ACCTTCGGGG TGGAGTTTGG GAGGTCGATG GTGAAGATGA GTAATGTTGA GGTGAAGACG GGGACTGACG GTGAAATTCG CACCGTTTGC 
TCCGCCGTTA ATTAG 

Retrieve as FASTA