Entry information : SaAPx03
Entry ID 16003
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-10 (Christophe Dunand)
Peroxidase information: SaAPx03
Name SaAPx03
Class Ascorbate peroxidase    [Orthogroup: APx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaAPx03
start..stop
S start..stop
SaAPx07 594 0 14..375 1..389
MguAPx03 590 0 1..375 1..368
StAPx06 565 0 51..375 45..361
LeAPx07 561 0 14..366 1..345
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1327962..1328153 192 N° 2 1328245..1328400 156 N° 3 1328818..1328938 121 N° 4 1329017..1329117 101
N° 5 1329190..1329277 88 N° 6 1329630..1329697 68 N° 7 1329772..1329873 102 N° 8 1331038..1331112 75
N° 9 1331201..1331278 78 N° 10 1331362..1331466 105 N° 11 1331802..1331843 42  
join(1327962..1328153,1328245..1328400,1328818..1328938,1329017..1329117,1329190 ..1329277,1329630..1329697,1329772..1329873,1331038..1331112,1331201..1331278,13 31362..1331466,1331802..1331843)


exon

Literature and cross-references SaAPx03
Protein ref. GenBank:   GER37734.1
Protein sequence: SaAPx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   375
PWM (Da):   %s   40860.75  
PI (pH):   %s   7.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTDRLAITHT PAQMASISAA AAAGTAAARF LPAASARLSL RSSLALSSAS IRSSPVRTRR FLQQKSTLRG FSLSSRRICY STVVSPKCAA SVPEQVKSAR EDIKELLKTK FCHPIMVRLG  WHDAGTYNKN IEEWPKRGGA NGSLRFEIEL NHGANAGLVN ALKLLQPIKD KYSSVTYADL FQLASATAIE EAGGPKIPMK YGRVDVTGPE QCPEEGRLPD AGPPSPAAHL RDVFYRMGLS  DKVLDDQEIV ALSGAHTLGR SRPDRSGWGK PETKYTKDGP GAPGGQSWTV QWLKFDNSYF KDIKEKRDEE LLVLPTDAVL FEDPSFKEYA EKYAVDQDAF FNDYAEAHAK LSNLGAKFDP 
PEGFSLDDSS SVDQP 

Retrieve as FASTA  
Remarks
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAGATC GTCTAGCAAT CACTCACACA CCAGCTCAAA TGGCTTCTAT CTCCGCCGCC GCAGCCGCCG GAACAGCCGC CGCCCGCTTC CTCCCCGCCG CCTCCGCCAG GCTCTCACTC  CGCTCCTCGC TCGCTCTCAG CTCCGCCTCC ATCAGATCGT CTCCTGTTCG TACTCGCCGT TTTCTTCAAC AGAAAAGCAC TCTGCGAGGG TTTTCGCTTT CGAGCCGGAG AATTTGTTAT  TCGACTGTGG TGTCGCCGAA ATGCGCGGCG TCAGTCCCCG AGCAGGTGAA GAGTGCTCGT GAAGATATAA AGGAGCTGCT TAAGACTAAG TTCTGTCACC CTATTATGGT TCGACTGGGT  TGGCATGATG CGGGAACATA TAACAAGAAT ATTGAGGAGT GGCCAAAGAG GGGAGGTGCT AATGGAAGTT TAAGATTTGA AATAGAACTA AACCATGGAG CAAATGCTGG GCTTGTCAAT  GCTCTTAAAC TTCTTCAGCC CATCAAGGAC AAGTATTCTA GTGTGACCTA TGCAGACTTG TTTCAATTGG CTAGTGCTAC TGCTATAGAG GAAGCTGGGG GACCCAAAAT CCCTATGAAA  TATGGGAGAG TAGACGTAAC TGGACCTGAA CAATGCCCAG AAGAAGGAAG GCTCCCAGAT GCTGGTCCTC CGTCACCTGC TGCTCATTTG CGAGATGTCT TTTACCGTAT GGGATTGAGC  GATAAGGTTC TTGATGACCA GGAAATAGTT GCTCTTTCGG GTGCACACAC TCTTGGAAGG TCAAGGCCGG ATCGTAGTGG GTGGGGCAAA CCTGAGACTA AATATACGAA AGACGGACCA  GGAGCTCCTG GAGGACAATC ATGGACAGTG CAGTGGCTAA AGTTCGATAA TTCCTACTTT AAGGATATCA AAGAAAAAAG GGATGAAGAA CTGTTAGTTT TACCGACAGA TGCTGTTCTG  TTCGAGGATC CTTCATTCAA GGAATATGCA GAGAAATATG CTGTCGATCA GGATGCATTT TTCAACGATT ATGCTGAAGC TCATGCTAAG CTTAGCAATC TTGGAGCTAA GTTTGACCCG 
CCTGAGGGCT TCTCATTAGA TGACAGTAGC TCAGTTGATC AGCCCTGA 

Retrieve as FASTA