Entry information : SaPrx[P]37
Entry ID 16004
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2019-12-10 (Christophe Dunand)
Peroxidase information: SaPrx[P]37
Name SaPrx[P]37
Class Class III peroxidase    [Orthogroup: Prx035]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx[P]37
start..stop
S start..stop
MguPrx13 358 1e-124 84..275 156..347
MguPrx13 101 4e-25 1..83 1..88
VvPrx53 345 1e-119 85..275 156..346
VvPrx53 92 7e-22 25..83 28..87
CroPrx51 332 1e-114 84..275 161..352
CroPrx51 96 4e-23 1..83 1..93
LePrx88 328 4e-113 65..274 141..345
LePrx88 85 4e-19 7..83 9..87
Literature and cross-references SaPrx[P]37
Protein ref. GenBank:   GER31768.1 [Incorrect prediction]
Protein sequence: SaPrx[P]37
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   275
PWM (Da):   %s   30627.98  
PI (pH):   %s   10.12
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSFFTKSFPT LIFTLTISLV LFANALTQPV TRKPKYQLSV DFYAKTCPQL DQLVASVTSQ QFKEAPISAP ATIRLFFHDC FVETGGPYYP VKKGRWDGKI SLASRVQPNL PRANSTVDEL  LKLFGSKGLT LEDLVILSGA HTIGFANCRH FVGRLYDYKG TKKPDPWIDP RLLKALKMSC PRFGGNTDIV APFDVTTPFS FDNAYYGNLE AKMGLLGSDQ ALFVDLRTKG LVQAMAKDKQ 
RFFQEFALAM DKMGGIGVKR GRRHGEKRKD CTLHM 

Retrieve as FASTA  
Remarks Pseudogene from genomic.. Exon 2 is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCTTTCT TCACTAAATC ATTTCCTACA CTCATTTTCA CCTTAACAAT CTCTCTTGTT CTTTTTGCCA ATGCACTTAC ACAACCCGTT ACACGTAAGC CTAAGTATCA ACTTTCGGTC  GATTTTTACG CGAAAACATG CCCACAGCTC GATCAGCTCG TCGCTTCTGT CACGTCACAG CAGTTCAAGG AAGCACCAAT TTCTGCGCCA GCCACCATTC GTCTTTTCTT TCACGACTGT  TTTGTTGAAA CAGGGGGCCC GTACTACCCG GTCAAAAAAG GCCGTTGGGA TGGCAAAATC TCGTTGGCCT CAAGAGTACA ACCCAACCTC CCACGAGCAA ACTCGACAGT TGACGAGCTT  CTAAAGCTCT TTGGGTCAAA GGGCCTAACG CTAGAGGACT TGGTCATACT CTCTGGGGCC CACACAATTG GGTTTGCCAA CTGCAGGCAT TTTGTGGGCC GGCTTTATGA CTACAAGGGC  ACGAAAAAGC CGGATCCATG GATCGACCCA AGGCTCCTTA AGGCCCTCAA AATGTCGTGC CCGCGTTTTG GCGGGAATAC TGATATCGTG GCCCCATTTG ATGTCACGAC TCCATTCTCG  TTCGACAATG CTTATTATGG GAACTTGGAG GCTAAGATGG GCCTGCTTGG GTCTGATCAG GCCCTGTTTG TGGACCTTAG GACAAAAGGT TTGGTTCAGG CAATGGCTAA GGATAAGCAA 
AGGTTTTTTC AAGAGTTTGC TTTGGCTATG GATAAAATGG GAGGCATTGG TGTGAAGAGA GGAAGAAGGC ATGGAGAGAA GAGAAAAGAC TGCACATTGC ACATGTGA 

Retrieve as FASTA