Entry information : SaPrx38
Entry ID 16005
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-04 (Christophe Dunand)
Peroxidase information: SaPrx38
Name SaPrx38
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx38
start..stop
S start..stop
MguPrx01 504 0 18..322 19..327
CroPrx42 461 6e-165 1..320 1..329
PtPrx15 449 3e-160 4..320 7..327
CcampPrx81 444 5e-158 7..322 11..334
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 345957..346229 273 N° 2 344390..345088 699  
complement(join(344390..345088,345957..346229))


exon

Literature and cross-references SaPrx38
Protein ref. GenBank:   GER32310.1
Protein sequence: SaPrx38
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323
PWM (Da):   %s   35269.59  
PI (pH):   %s   6.7
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASNNILLLL VLIPFLTAES KLTPDYYHKT CPQFSQIVQQ VVADKQLAIP TTAAGTLRVF FHDCIVGGCD ASLLVSSSPF NTAERDNSIN QALPGDAFDL ITRAKTRLEL ACPRTVSCAD  ILAEATRDLV SMVGGPYYPV RLGRKDSLDS RAADVPGHVA LPNMTISTII TMFEAKGFTV QEMVALTGAH TIGFSHCSEF ADRILDGHDD PSMNPEYARG LRKLCAGYRA DPTIAAFNDP 
MSPGRFDNTY FVNLQRGMGL LASDQAMATD PRTKPFVDLY ARDEKAFYDA FAHAMEKVSV HNVKTGKKGE VRRRCDAFNS MHI 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGTCCA ACAATATTCT CCTCCTACTC GTTCTTATCC CATTCCTAAC GGCCGAATCA AAACTAACCC CCGACTACTA CCACAAAACC TGCCCCCAAT TTTCCCAGAT CGTCCAGCAG  GTCGTGGCCG ACAAGCAGCT CGCCATCCCC ACCACCGCCG CCGGCACTCT CCGCGTCTTC TTCCACGACT GCATAGTCGG CGGCTGCGAC GCCTCCCTCC TCGTCTCCTC CTCTCCTTTC  AACACCGCCG AGCGCGACAA CTCTATCAAC CAGGCCCTCC CCGGGGACGC CTTCGACCTC ATCACCCGCG CCAAGACCCG CCTCGAGCTC GCCTGCCCGA GGACCGTATC CTGCGCGGAC  ATCCTCGCGG AGGCCACCCG CGACCTCGTC TCCATGGTCG GCGGCCCTTA CTACCCCGTC CGCCTCGGCC GCAAGGACAG CCTCGACTCC CGCGCAGCCG ACGTCCCCGG CCACGTCGCC  CTCCCCAACA TGACCATCTC CACCATCATC ACCATGTTCG AGGCCAAGGG GTTCACCGTC CAGGAGATGG TTGCGCTCAC GGGCGCCCAC ACCATCGGCT TCTCCCACTG CTCCGAGTTC  GCCGACCGCA TACTCGACGG GCATGACGAT CCGAGCATGA ACCCGGAGTA CGCGCGCGGG CTCAGGAAGC TTTGCGCGGG CTACCGTGCG GACCCGACTA TTGCGGCGTT TAATGACCCA  ATGAGCCCTG GAAGGTTCGA CAATACGTAC TTTGTGAACC TGCAGAGAGG GATGGGGCTG CTGGCGAGCG ACCAGGCCAT GGCTACGGAC CCGAGGACGA AGCCGTTTGT GGATCTCTAT  GCTAGAGATG AGAAGGCGTT CTACGACGCG TTTGCGCATG CCATGGAGAA GGTGAGCGTG CATAATGTGA AGACGGGGAA GAAAGGGGAG GTTAGGCGTA GGTGTGATGC CTTCAATTCC 
ATGCACATCT GA 

Retrieve as FASTA