Entry information : SaPrx39
Entry ID 16006
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-04 (Christophe Dunand)
Peroxidase information: SaPrx39
Name SaPrx39
Class Class III peroxidase    [Orthogroup: Prx033]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx39
start..stop
S start..stop
MguPrx19 390 1e-136 18..326 26..333
PpePrx21 339 6e-117 9..326 10..323
AtPrx29 328 2e-112 23..323 38..335
AhalPrx23 327 5e-112 23..323 38..335
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2060191..2060394 204 N° 2 2060809..2061172 364 N° 3 2063196..2063611 416  
join(2060191..2060394,2060809..2061172,2063196..2063611)


exon

Literature and cross-references SaPrx39
Protein ref. GenBank:   GER33400.1
Protein sequence: SaPrx39
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327
PWM (Da):   %s   35329.24  
PI (pH):   %s   7.38
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEPKICAVIF LLLLIFRAES VSLSYDFYHQ SCPQLEHIVR AEVESASVLD PTTPAALLRL MFHDCQVQGC DGSILLDPDE RKVKFSETSS SKNFGIRKKE LIEVMKSTVE AVCPRKVSCS  DIIVLAAQEA VALSGGPTIN VRLGRRDSPN PPNLTLVDAS LPSADTDVDT MLRIFAAKGM SVQESVAILG AHTLGTTHCV NLKSRLYGRR KDNKAQIPAA AKPGFLNALR VQCPVGPTAQ 
AVGMVQNDLT SVLFDNQYFV GSASGLGVLD IDAQMPVDPR TRPHVETFAV DVATFFRAFT SAFVKLSQSN VLTGDRGVIR ESCRTLY 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAACCCA AGATCTGTGC AGTTATTTTC CTGCTGTTGT TGATTTTTCG AGCTGAAAGT GTCAGCTTGT CTTACGATTT CTACCACCAA TCCTGCCCTC AGCTGGAGCA TATTGTCCGA  GCCGAGGTTG AGTCGGCCTC TGTGCTCGAT CCCACCACCC CTGCAGCCCT TCTCAGGCTC ATGTTTCATG ACTGCCAAGT TCAGGGTTGT GATGGCTCCA TCCTTCTCGA TCCCGACGAA  CGCAAGGTCA AATTCTCTGA AACTTCGTCT TCCAAGAATT TTGGAATCCG AAAGAAAGAA TTGATAGAGG TCATGAAATC AACGGTGGAG GCTGTTTGCC CGCGAAAGGT GTCGTGTTCG  GACATCATAG TATTGGCCGC ACAAGAAGCT GTTGCTTTAT CCGGAGGGCC CACAATTAAT GTCCGCTTAG GCCGTAGGGA TTCTCCAAAC CCTCCAAATC TCACCCTCGT TGATGCCTCA  CTTCCTTCGG CCGACACTGA TGTCGATACT ATGCTCCGAA TCTTCGCGGC AAAGGGAATG TCCGTACAAG AATCCGTCGC CATTTTAGGG GCCCACACAC TGGGAACCAC ACACTGCGTC  AACCTCAAGA GCCGTTTATA CGGGCGGCGG AAGGACAATA AGGCTCAAAT TCCGGCGGCC GCAAAACCAG GATTCTTAAA TGCGTTGAGA GTGCAGTGTC CCGTGGGGCC CACGGCCCAG  GCAGTGGGGA TGGTCCAGAA CGACCTCACC TCGGTGCTGT TCGACAACCA ATATTTTGTG GGCTCGGCGA GTGGACTCGG CGTGCTCGAT ATCGACGCCC AGATGCCTGT GGACCCGCGG  ACGAGGCCGC ACGTCGAGAC GTTCGCCGTT GACGTGGCGA CATTTTTCCG GGCATTCACG TCGGCGTTTG TCAAGCTGTC ACAGTCCAAT GTTCTCACGG GTGACCGAGG TGTGATTAGG 
GAGAGTTGCA GAACACTGTA TTGA 

Retrieve as FASTA