Entry information : SaPrx41
Entry ID 16008
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-04 (Christophe Dunand)
Peroxidase information: SaPrx41
Name SaPrx41
Class Class III peroxidase    [Orthogroup: Prx033]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx41
start..stop
S start..stop
MguPrx87 499 6e-180 17..334 2..319
LePrx56 473 3e-169 6..334 14..341
CsPrx39 453 2e-161 23..335 19..333
GhPrx14 452 4e-161 3..334 2..332
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 397780..398022 243 N° 2 398876..399055 180 N° 3 399194..399359 166 N° 4 399799..400217 419
join(397780..398022,398876..399055,399194..399359,399799..400217)


exon

Literature and cross-references SaPrx41
Protein ref. GenBank:   GER34400.1
Protein sequence: SaPrx41
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335
PWM (Da):   %s   36569.84  
PI (pH):   %s   4.55
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGETEFCCHK PLYSHNQLLL LSFVFMLFFP PFSSSFSFDF YATSCPAAEM MVKNTVRSAS NLDPTVPGKL LRLLFHDCFI EGCDGSVLLQ GNGTEKSDPA NKSLGGFSVI DSAKRVLEIF  CPQIVSCADI LALAARDAVE FAGGPNIQIP TGRKDGKISV SANVRPNIID TSFTLDEMAK VFSAKGLSMD DLVTLSGAHT IGRSHCNSFN DRFNLDSDGN LTLIDSSLDR QYASQLTKMC 
QAGASDDSVT VENDPASPQQ FDNNYYKILL EHRGLFQSDS ALLNDVRTRD RVMEFADSQD SFFESWGVSF LKLVSVGVKT DEDGEIRQLC AVSNG 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGAGAAA CAGAATTTTG CTGCCACAAA CCATTATATT CTCATAACCA GCTGCTCCTG CTGTCTTTTG TCTTCATGCT TTTTTTCCCT CCATTTTCTT CGAGTTTTTC TTTTGACTTT  TATGCCACGT CATGCCCGGC TGCTGAGATG ATGGTGAAAA ATACCGTCCG ATCAGCTTCC AATTTGGATC CAACGGTTCC CGGAAAGCTC CTTCGGTTGC TTTTCCATGA CTGCTTTATT  GAGGGCTGTG ATGGATCTGT GTTATTACAA GGAAATGGAA CTGAAAAGAG TGATCCAGCC AACAAATCTC TAGGAGGATT TTCAGTGATA GACTCAGCTA AACGAGTGCT CGAAATATTT  TGCCCCCAAA TTGTCTCTTG TGCTGATATA CTTGCATTGG CTGCTAGGGA CGCCGTTGAA TTTGCGGGTG GACCTAATAT TCAGATCCCG ACTGGGAGGA AAGACGGTAA AATTTCTGTA  TCTGCAAATG TCAGACCAAA CATTATAGAC ACAAGTTTCA CGTTAGATGA GATGGCTAAG GTTTTCTCTG CCAAGGGATT ATCTATGGAC GACCTCGTTA CCCTCTCAGG AGCACACACA  ATTGGAAGAT CTCATTGCAA CTCATTCAAC GACAGATTCA ACCTCGACTC TGACGGAAAC CTCACGCTGA TTGACTCATC GTTAGACCGA CAATACGCAT CCCAACTCAC GAAAATGTGC  CAGGCTGGCG CCAGCGATGA TTCGGTCACG GTCGAAAACG ACCCTGCTTC ACCACAGCAG TTTGACAACA ATTACTACAA GATTCTGTTG GAACACAGGG GACTTTTCCA GTCAGATTCC  GCGTTGCTTA ACGATGTAAG GACAAGAGAT CGGGTGATGG AATTTGCAGA CAGTCAAGAT AGTTTCTTTG AGAGCTGGGG TGTGTCCTTT CTGAAACTTG TTAGTGTCGG TGTGAAGACA 
GATGAAGATG GGGAAATTAG GCAATTATGT GCTGTGTCTA ATGGATGA 

Retrieve as FASTA