1. Browse the Database
  2. View Redoxidase
Entry information : SaPrx42
Entry ID 16009
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-04 (Christophe Dunand)
Peroxidase information: SaPrx42
Name SaPrx42
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx42
start..stop		 S start..stop
MguPrx18 473 2.09e-169 18..334 20..335
OcPrx21 462 3.06e-165 15..333 15..327
InPrx08 456 1e-162 11..334 6..332
IaquPrx22 452 3.25e-161 1..334 1..331
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '16009' 'join(208353..209357)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 208353..209357 1003  
join(208353..209357)


exon

Literature and cross-references SaPrx42
Protein ref. GenBank:   GER35772.1
Protein sequence: SaPrx42
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   334 (312)
PWM (Da):   %s   36390.34 (34108.0)  
PI (pH):   %s   9.15 (9.00) Peptide Signal:   %s   cut: 23 range:23-334
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPPPPFLLL LALLLLSPAA RSQRRRTPPL SADYYARSCP TFDQIVSRTT TDKQISSPTT AAGTLRLFFH DCFVSGCDAS ALVSPTRTGG PTEREADINL SLPGDAFDVV VRAKTELELI  CPGVVSCADI LATAARNLVV MAGGPHYNVL LGRKDSLTSR ASDVKGQLPK PTMTMAQMIQ IFESKGFTVQ EMVALSGAHT IGFSHCKEFK SNIYNYKGSQ SGFHPAYYPQ FAAGLRRACS 
NYTKNPDLSV VNDIMTPHTF DNMYYSNVKK GLGLLSSDLA LSSDPRTRNY VDLYSKNQSA FFDAFAKAME KLSVYGVKTG RQGEVRRRCD AFNN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. No intron
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCCGC CGCCGCCGTT CCTCCTACTG CTCGCCCTCC TCCTCCTCAG CCCCGCCGCC CGCTCCCAGC GCCGCCGCAC GCCGCCCCTC TCCGCCGACT ACTACGCCCG CTCCTGCCCC  ACCTTCGACC AGATCGTGAG CCGCACCACC ACCGACAAGC AGATCTCGTC CCCCACCACC GCCGCCGGCA CCCTCCGCCT CTTCTTCCAC GACTGCTTCG TCAGCGGCTG CGACGCCTCC  GCCCTCGTCT CCCCCACGCG CACCGGCGGC CCCACCGAGC GCGAAGCCGA CATCAACCTC TCCCTCCCCG GCGACGCCTT CGACGTCGTC GTCCGCGCCA AGACCGAGCT CGAGCTCATC  TGCCCCGGCG TCGTCTCCTG CGCCGACATC CTCGCCACCG CCGCCCGGAA CCTGGTCGTG ATGGCCGGCG GCCCGCACTA CAATGTACTG TTGGGCCGTA AGGACTCGCT CACCTCCCGG  GCCTCCGACG TCAAGGGGCA ACTCCCAAAG CCCACTATGA CCATGGCCCA AATGATCCAA ATATTCGAAT CCAAAGGATT CACTGTCCAG GAGATGGTGG CCCTATCCGG AGCCCACACA  ATCGGGTTCT CCCATTGCAA AGAGTTCAAA TCCAATATCT ACAATTACAA GGGGTCTCAA TCAGGATTCC ACCCGGCTTA CTACCCGCAA TTCGCCGCCG GACTCCGGCG CGCCTGCTCC  AACTACACGA AAAACCCAGA TCTATCAGTA GTCAACGATA TAATGACGCC GCACACATTC GACAATATGT ACTACAGCAA TGTGAAAAAG GGGTTGGGGC TTTTGTCGTC GGATCTCGCA  TTGAGCTCCG ACCCGAGAAC CCGAAACTAT GTTGATCTTT ACTCGAAAAA CCAGAGCGCG TTTTTCGATG CTTTTGCGAA GGCCATGGAG AAGCTCAGTG TTTATGGTGT GAAGACGGGG 
AGGCAAGGTG AAGTTAGGCG CAGGTGTGAT GCTTTTAACA ATTGA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCCGC CGCCGCCGTT CCTCCTACTG CTCGCCCTCC TCCTCCTCAG CCCCGCCGCC CGCTCCCAGC GCCGCCGCAC GCCGCCCCTC TCCGCCGACT ACTACGCCCG CTCCTGCCCC  ACCTTCGACC AGATCGTGAG CCGCACCACC ACCGACAAGC AGATCTCGTC CCCCACCACC GCCGCCGGCA CCCTCCGCCT CTTCTTCCAC GACTGCTTCG TCAGCGGCTG CGACGCCTCC  GCCCTCGTCT CCCCCACGCG CACCGGCGGC CCCACCGAGC GCGAAGCCGA CATCAACCTC TCCCTCCCCG GCGACGCCTT CGACGTCGTC GTCCGCGCCA AGACCGAGCT CGAGCTCATC  TGCCCCGGCG TCGTCTCCTG CGCCGACATC CTCGCCACCG CCGCCCGGAA CCTGGTCGTG ATGGCCGGCG GCCCGCACTA CAATGTACTG TTGGGCCGTA AGGACTCGCT CACCTCCCGG  GCCTCCGACG TCAAGGGGCA ACTCCCAAAG CCCACTATGA CCATGGCCCA AATGATCCAA ATATTCGAAT CCAAAGGATT CACTGTCCAG GAGATGGTGG CCCTATCCGG AGCCCACACA  ATCGGGTTCT CCCATTGCAA AGAGTTCAAA TCCAATATCT ACAATTACAA GGGGTCTCAA TCAGGATTCC ACCCGGCTTA CTACCCGCAA TTCGCCGCCG GACTCCGGCG CGCCTGCTCC  AACTACACGA AAAACCCAGA TCTATCAGTA GTCAACGATA TAATGACGCC GCACACATTC GACAATATGT ACTACAGCAA TGTGAAAAAG GGGTTGGGGC TTTTGTCGTC GGATCTCGCA  TTGAGCTCCG ACCCGAGAAC CCGAAACTAT GTTGATCTTT ACTCGAAAAA CCAGAGCGCG TTTTTCGATG CTTTTGCGAA GGCCATGGAG AAGCTCAGTG TTTATGGTGT GAAGACGGGG 
AGGCAAGGTG AAGTTAGGCG CAGGTGTGAT GCTTTTAACA ATTGA 

Retrieve as FASTA