Entry information : SaPrx48
Entry ID 16015
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-05 (Christophe Dunand)
Peroxidase information: SaPrx48
Name SaPrx48
Class Class III peroxidase    [Orthogroup: Prx026]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx48
start..stop
S start..stop
SaPrx05 543 0 1..314 1..319
MguPrx56 454 8e-163 24..314 10..305
InPrx04 453 5e-162 2..313 3..323
CroPrx09 446 2e-159 22..314 24..321
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1777446..1777655 210 N° 2 1777759..1777947 189 N° 3 1778051..1778213 163 N° 4 1778596..1778978 383
join(1777446..1777655,1777759..1777947,1778051..1778213,1778596..1778978)


exon

Literature and cross-references SaPrx48
Protein ref. GenBank:   GER49053.1
Protein sequence: SaPrx48
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   314
PWM (Da):   %s   34361.25  
PI (pH):   %s   7.97
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKMAIFNLKV LAIVALLANT MADGLSMNYY VITCPIADII IKNTVRTALI SDPTLSGPLL RMHFHDCFVE GCDGSILIDS TKNNTAEKDS PANLSLRGYE IIDAAKEALE RQCPGVVSCA  DILAMAARDA VFFSGGPYYE IPKGRKDGWR SKIEDTVRLP PPNLNSTELI DMFSRRGFSA REMVALSGAH TLGVARCLSF KSRLNRNADP TLDPQFAKTL SATCSKGDMA EQPFDSTRTV 
FDGQYYRALQ RGTGVLFSDQ TLFVGPATRA FVNGYAMNPA SFFLDFQRSM VKMGTLDVKE GPNGEVRDNC RRVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAAATGG CCATTTTCAA TCTCAAAGTG TTGGCTATAG TAGCACTTTT GGCGAACACG ATGGCCGACG GGCTGAGCAT GAACTACTAC GTAATCACGT GCCCGATTGC TGACATCATC  ATAAAGAATA CCGTGCGTAC GGCATTGATA TCTGACCCGA CCCTTTCCGG GCCACTCCTT CGAATGCATT TTCACGATTG TTTTGTCGAG GGATGTGACG GGTCGATATT GATCGACTCG  ACTAAAAACA ACACGGCGGA AAAAGACTCG CCGGCCAATC TTAGCTTAAG GGGATACGAA ATAATCGATG CTGCTAAAGA GGCGCTCGAG AGACAGTGCC CTGGAGTCGT TTCGTGCGCC  GATATCCTGG CCATGGCTGC TAGAGATGCT GTTTTCTTTT CGGGAGGTCC GTATTACGAG ATACCGAAAG GAAGGAAAGA CGGGTGGAGA TCGAAGATTG AGGACACGGT CCGACTTCCG  CCACCGAACC TCAACAGTAC GGAGCTCATC GACATGTTTT CGCGGCGTGG ATTTAGCGCT CGAGAAATGG TGGCTTTGTC TGGGGCCCAC ACCCTTGGTG TGGCTCGGTG CTTGTCGTTC  AAGAGCCGAT TGAACCGAAA CGCGGACCCC ACATTGGACC CGCAGTTTGC AAAGACGCTC TCCGCCACAT GCAGCAAGGG TGACATGGCA GAGCAGCCCT TCGACTCCAC AAGGACGGTC  TTCGACGGCC AATACTACAG GGCCCTGCAG AGGGGGACAG GTGTCCTGTT CTCGGACCAG ACTCTGTTTG TGGGCCCCGC CACACGGGCC TTTGTTAACG GGTACGCCAT GAACCCGGCC 
TCATTCTTCT TGGACTTCCA ACGGTCCATG GTGAAGATGG GAACATTGGA TGTCAAGGAA GGGCCCAACG GCGAGGTCAG GGACAACTGC AGACGGGTCA ACTAG 

Retrieve as FASTA