Entry information : SaPrx49
Entry ID 16016
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-05 (Christophe Dunand)
Peroxidase information: SaPrx49
Name SaPrx49
Class Class III peroxidase    [Orthogroup: Prx066]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx49
start..stop
S start..stop
SaPrx57 596 0 11..448 7..410
MguPrx07 434 3e-152 126..448 17..334
LePrx55 314 8e-104 147..448 135..434
NtPrx24-1B 308 1e-101 152..448 139..433
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 736559..737152 594 N° 2 737693..738445 753  
join(736559..737152,737693..738445)


exon

Literature and cross-references SaPrx49
Protein ref. GenBank:   GER51549.1
Protein sequence: SaPrx49
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   448
PWM (Da):   %s   48604.48  
PI (pH):   %s   6.12
Sequence
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Send to Peroxiscan
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MANGGMFLWA TFLSHALFGP LLVSAHHGHL HHHRLWRPHV PGLDIINRPV QNFDDFAKII KGMEGGESLP LLLEPAMQKP KRHEQHGLQA PSTGPNPVDG SGNGAQQQIE STSEAQIPEP  TPGAHIPEPT TLGALPPEAT TSGALLPEAT TALLEGFYEQ SCPQAEQIVS EVINKNFQKD PTLAPALIRL FFHDCFVTGC DASILLDRTP TGEPVEKMAP QNGKFVHGFD ALDEAKTRLE  AECPGVVSCA DLLAFANRES LVLTGVPSYP VPAGRRDSRA SLAKNTEADV PFPQSTGQEM IQLFERKGLT VEEMVVLTGA HSVGSAHCTV VAGRFRDPGK AAGIDRGYLM KMQVMTACLN 
DTQDLAFDPL SQQKMDSRFY KELLKNRALL ESDQNLVNEP SANLVMRRYA DNQNGWMAKF VASITKLGAI EVLTGNQGEI RRQCRAVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Long PS and intron 1.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCAACG GAGGAATGTT CCTTTGGGCA ACATTCCTAT CGCACGCATT GTTCGGCCCT CTGCTCGTCT CCGCCCACCA CGGCCACCTC CACCACCACC GCTTATGGCG GCCGCATGTC  CCGGGCCTCG ACATCATCAA CCGCCCGGTA CAAAATTTTG ACGACTTTGC CAAAATCATA AAGGGTATGG AGGGTGGTGA GTCCCTTCCT CTCCTCCTCG AGCCCGCCAT GCAGAAGCCC  AAAAGACACG AGCAACACGG TTTGCAGGCT CCGTCGACGG GCCCCAATCC CGTGGATGGG TCGGGAAATG GAGCCCAACA ACAAATCGAG TCGACTTCAG AGGCCCAAAT ACCGGAGCCA  ACACCAGGAG CCCATATACC AGAGCCCACG ACTCTGGGGG CCCTACCGCC AGAGGCCACG ACGTCGGGGG CTCTGCTGCC AGAGGCCACG ACGGCCCTGC TAGAGGGATT CTACGAGCAG  AGCTGCCCGC AGGCCGAGCA GATCGTGAGC GAGGTCATCA ACAAGAACTT TCAGAAGGAC CCTACCCTCG CTCCCGCTCT AATACGCCTG TTTTTTCACG ATTGTTTCGT CACGGGTTGC  GACGCGTCGA TCCTACTAGA CCGGACCCCA ACAGGCGAGC CCGTCGAGAA GATGGCCCCA CAGAACGGCA AGTTCGTCCA CGGGTTCGAC GCCCTGGACG AGGCCAAAAC CCGGCTCGAG  GCCGAGTGCC CCGGCGTCGT CTCGTGCGCG GACCTCCTCG CCTTTGCCAA CCGCGAATCC CTCGTCTTAA CTGGCGTCCC TTCGTACCCC GTCCCCGCGG GCCGGCGTGA CAGTCGAGCC  TCCCTCGCGA AAAACACCGA GGCCGACGTC CCCTTTCCCC AGTCCACGGG CCAGGAGATG ATCCAGCTGT TCGAGCGCAA GGGCCTGACC GTGGAGGAGA TGGTCGTGCT GACCGGGGCC  CACTCGGTGG GGTCCGCGCA CTGCACTGTC GTGGCCGGAA GGTTCCGGGA CCCGGGAAAG GCGGCGGGTA TCGACAGAGG TTATTTGATG AAGATGCAGG TGATGACGGC ATGCTTGAAC  GATACTCAGG ACCTAGCATT CGACCCGCTT TCGCAGCAGA AGATGGACTC GAGGTTCTAC AAGGAGCTGT TAAAGAACCG GGCATTGCTA GAGTCGGACC AGAACCTGGT GAACGAGCCG  AGTGCGAATC TTGTCATGAG GAGGTACGCG GACAATCAGA ATGGGTGGAT GGCGAAGTTC GTGGCCAGCA TTACTAAATT GGGGGCTATA GAGGTGCTCA CGGGGAATCA AGGGGAGATC 
AGGAGACAGT GCAGGGCCGT CAACTGA 

Retrieve as FASTA