Entry information : SaPrx53
Entry ID 16020
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-06 (Christophe Dunand)
Peroxidase information: SaPrx53
Name SaPrx53
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx53
start..stop
S start..stop
SaPrx54 634 0 1..324 1..324
SaPrx60 548 0 1..324 1..323
MguPrx40 512 0 18..324 18..324
MguPrx102 468 8e-168 3..324 4..324
Literature and cross-references SaPrx53
Protein ref. GenBank:   GER53241.1 [Incorrect prediction]
Protein sequence: SaPrx53
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324
PWM (Da):   %s   35364.9  
PI (pH):   %s   8.79
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATQKLFVLC LFMFIFVHRV AAQSLSTNFY YKTCPNVGAI VKQTTARFIS RAPSLAPALL RMHFHDCFVR GCDGSVLINS TANNTAERDS FPNLSLRGFQ VVDAAKSAVE KYCPGKVSCA  DILALVARDA VSQIKGPFWE VPLGRRDGTV SIANEVLANL PPPFFNITQL ISNFASKGLT VKDLVVLSGG HTIGVSHCSS FTNRLYNFTG RNDADPSMDP NYVAALKRRC SPTDTTTIVQ 
MDPGSFIDFD TDYFSIVKKR RGLFTTDAEL LKNDETRAYV QQHMTSSGDP SFFADFAESM VKMGKIGVLT GTAGQIRRVC SVVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. The prediction from NCBI (GER53241.1) contains 3 ORFs.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAACTC AGAAGCTATT TGTTCTTTGC TTATTCATGT TCATTTTCGT TCATCGGGTG GCGGCCCAAA GCCTGTCGAC CAATTTCTAC TACAAAACGT GTCCGAATGT TGGGGCTATC  GTGAAACAAA CGACCGCAAG ATTCATTTCT CGAGCGCCAT CACTTGCGCC GGCTTTACTT AGAATGCATT TCCATGATTG TTTTGTTAGG GGTTGTGATG GGTCAGTACT TATAAACTCC  ACGGCCAACA ACACAGCCGA GAGGGACTCT TTTCCGAACC TTAGCCTTAG AGGGTTTCAA GTTGTAGATG CTGCAAAATC TGCAGTCGAG AAATATTGTC CCGGAAAAGT TTCTTGCGCT  GATATCCTGG CATTAGTTGC TCGTGATGCA GTTTCACAGA TAAAGGGACC ATTTTGGGAA GTTCCTTTGG GCCGACGAGA TGGAACTGTA TCGATTGCGA ATGAGGTGCT AGCGAATCTT  CCACCTCCTT TCTTCAACAT CACTCAACTC ATTTCCAATT TCGCTTCAAA GGGTTTAACC GTCAAGGACC TCGTTGTCCT CTCAGGTGGA CACACAATCG GGGTTTCGCA CTGCTCGAGT  TTCACGAACC GACTGTACAA CTTCACGGGA AGGAACGACG CGGACCCAAG CATGGACCCG AACTACGTGG CGGCACTCAA GAGGCGGTGC TCCCCTACGG ACACGACCAC CATAGTACAG  ATGGACCCCG GCAGCTTCAT CGATTTCGAC ACGGACTACT TCTCGATAGT GAAGAAGAGA CGGGGGCTTT TCACCACCGA TGCTGAGCTT CTGAAGAATG ACGAGACGAG GGCGTACGTG  CAGCAGCACA TGACGTCATC TGGTGACCCG AGTTTCTTCG CGGATTTTGC GGAGTCAATG GTGAAGATGG GCAAAATTGG GGTTCTCACA GGGACTGCTG GCCAAATCAG AAGGGTCTGC 
TCTGTGGTTA ATTAG 

Retrieve as FASTA