Entry information : SaPrx55
Entry ID 16022
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-05 (Christophe Dunand)
Peroxidase information: SaPrx55
Name SaPrx55
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx55
start..stop
S start..stop
SaPrx56 488 5e-176 5..316 17..323
SbaPrx03 458 4e-164 3..316 6..318
GrPrx38 452 1e-161 5..316 14..323
GhPrx38 444 1e-158 5..316 14..323
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 410008..410217 210 N° 2 409576..409767 192 N° 3 409325..409490 166 N° 4 408449..408831 383
complement(join(408449..408831,409325..409490,409576..409767,410008..410217))


exon

Literature and cross-references SaPrx55
Protein ref. GenBank:   GER55742.1
Protein sequence: SaPrx55
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316
PWM (Da):   %s   33879.91  
PI (pH):   %s   8.76
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATNFWVPLI FSLLVIGSSK SQSLLSSGFY STTCPNLQSI VRGIVNRAVS NEARMGASLL RLHFHDCFVN GCDASVLLDD TANFTGEKTA FPNNNSLRGF EVIDNIKTQV EAACRGVVSC  ADILAIAARD GVIALGGPSW QVGLGRRDST TASRSDANNQ IPAPTLNLSG LITSFNRKGF TPRELVALSG GHTIGQARCT TFRTRIYNES NINGQFAATR RRNCPASGGD NNLAPLDSSP 
AQFNNDYFRD LVGLRGLLHS DQQLFNNGST DSIVNGYVYN GNSFLTDFAN AMVKMSNLSP LTGTNGQIRA NCRRTN 

Retrieve as FASTA  
Remarks
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAACTA ACTTTTGGGT TCCATTAATA TTTTCCTTGC TCGTGATTGG ATCGAGCAAA TCCCAGTCAT TATTGTCGTC GGGATTCTAT AGCACGACAT GCCCTAACCT ACAATCGATT  GTAAGAGGAA TCGTGAACCG AGCTGTGTCG AACGAAGCTC GTATGGGCGC TTCTTTGCTT CGTCTCCATT TTCACGATTG TTTTGTTAAT GGATGTGATG CATCGGTTTT ACTCGACGAC  ACGGCAAATT TCACGGGAGA GAAAACCGCG TTTCCCAACA ACAACTCGTT GAGGGGATTT GAGGTGATCG ACAACATCAA AACGCAGGTG GAGGCAGCGT GCCGTGGGGT CGTCTCCTGT  GCCGACATCT TGGCCATCGC GGCACGCGAT GGAGTTATTG CGCTCGGGGG TCCGAGCTGG CAAGTTGGGC TCGGGAGGAG GGACTCAACC ACCGCAAGTC GAAGCGATGC CAACAACCAA  ATCCCAGCAC CGACTCTCAA TTTGAGTGGG CTCATTACCT CCTTTAATCG CAAAGGTTTC ACACCGAGGG AACTTGTTGC CCTTTCAGGT GGGCACACGA TAGGGCAGGC GAGGTGCACG  ACCTTTCGGA CAAGAATATA CAACGAGTCA AACATAAACG GGCAATTTGC GGCCACCAGA CGAAGAAACT GCCCGGCTAG CGGTGGAGAC AACAATCTAG CGCCACTAGA CAGCAGTCCC  GCTCAATTCA ACAACGACTA TTTCAGGGAT TTAGTGGGTT TGAGGGGTTT GCTGCATTCA GACCAACAAC TTTTCAACAA TGGCTCGACC GACAGTATTG TCAACGGTTA CGTTTATAAC 
GGAAACAGTT TTCTAACCGA TTTTGCCAAT GCTATGGTCA AAATGTCGAA CCTTAGCCCA TTGACCGGGA CCAATGGCCA GATCAGGGCT AATTGTAGGA GGACCAACTA A 

Retrieve as FASTA