Entry information : SaPrx56
Entry ID 16023
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-06 (Christophe Dunand)
Peroxidase information: SaPrx56
Name SaPrx56
Class Class III peroxidase    [Orthogroup: Prx012]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx56
start..stop
S start..stop
SaPrx55 485 9e-175 36..323 29..316
SbaPrx03 451 3e-161 6..323 3..318
VvPrx35 449 3e-160 14..323 16..326
EguPrx23 444 2e-158 28..323 23..319
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 403647..403877 231 N° 2 403049..403240 192 N° 3 402757..402922 166 N° 4 402136..402518 383
complement(join(402136..402518,402757..402922,403049..403240,403647..403877))


exon

Literature and cross-references SaPrx56
Protein ref. GenBank:   GER55741.1
Protein sequence: SaPrx56
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323
PWM (Da):   %s   34631.2  
PI (pH):   %s   6.88
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAGTYSTILT FFTRFMFVII LMRAIYIVNA QLTPNFYNQS CPSLNSIISQ IVNQNVSVDP RMGASLLRLH FHDCFVNGCD ASVLLDDTAN FTGEKTALPN NNSLRGFEVI DAIKSQVESA  CPGIVSCADI LAVAARDGVV ALGGPSWDVA LGRRDATNAS RSDANNQIPS PFLNLSGLVT SFSNKGFNLT ELVALSGGHT IGQARCTLFR SRIYNETNIN ATFAAARQAN CPSSGGDNNL 
APLDSSPVQF NNDYFRDLVG LRGLLHSDQQ LFNGGSADAI VTNYANNSNT FLTDFANAMV KMSNLNPLTG TNGQIRANCR RIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCGGCA CTTATAGCAC AATATTGACA TTTTTTACTC GATTTATGTT CGTTATCATT CTAATGAGAG CTATCTATAT CGTCAATGCC CAACTGACGC CAAATTTCTA CAACCAATCG  TGCCCTAGCT TAAATTCCAT CATCAGTCAA ATAGTGAATC AAAATGTGTC GGTCGACCCG CGTATGGGCG CGTCCCTTCT TCGTCTCCAT TTCCACGACT GTTTTGTCAA CGGATGCGAC  GCGTCGGTTC TGCTTGACGA CACGGCGAAC TTCACGGGAG AAAAGACAGC ACTTCCCAAC AACAACTCGT TGAGAGGGTT TGAAGTAATC GACGCCATCA AATCTCAGGT GGAGTCTGCG  TGCCCCGGAA TCGTCTCGTG CGCCGACATT CTCGCCGTTG CCGCCCGTGA TGGCGTCGTC GCACTAGGGG GACCGAGTTG GGACGTCGCC TTGGGGAGAC GAGACGCCAC AAATGCAAGT  CGTAGCGACG CGAATAACCA AATTCCGTCA CCTTTCCTCA ACCTCTCGGG CCTCGTCACT TCCTTTTCGA ACAAGGGTTT CAATTTGACA GAGTTAGTCG CCTTATCAGG GGGTCACACG  ATCGGACAGG CGAGATGCAC ATTATTCAGG TCGAGGATAT ATAACGAGAC GAACATAAAT GCCACGTTTG CAGCGGCCAG GCAGGCCAAC TGCCCGTCCA GTGGCGGAGA CAACAATCTG  GCGCCACTGG ACAGCAGTCC TGTGCAATTC AACAACGACT ACTTTCGGGA TTTGGTGGGT TTGAGGGGTT TGCTACACTC GGACCAGCAA CTTTTCAATG GTGGCTCGGC CGATGCTATT  GTCACCAATT ATGCCAACAA TTCGAATACA TTCCTAACTG ACTTTGCCAA TGCCATGGTC AAAATGTCGA ACCTTAATCC GTTGACCGGG ACCAACGGCC AGATCAGGGC TAACTGCAGG 
AGGATCAATT AA 

Retrieve as FASTA