Entry information : SaPrx57
Entry ID 16024
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-05 (Christophe Dunand)
Peroxidase information: SaPrx57
Name SaPrx57
Class Class III peroxidase    [Orthogroup: Prx066]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx57
start..stop
S start..stop
SaPrx49 604 0 7..410 11..448
MguPrx07 413 1e-144 105..410 28..334
LpPrx05 303 2e-99 98..410 177..487
CcampPrx41 296 1e-98 113..410 45..340
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 793911..794390 480 N° 2 792657..793409 753  
complement(join(792657..793409,793911..794390))


exon

Literature and cross-references SaPrx57
Protein ref. GenBank:   GER56021.1
Protein sequence: SaPrx57
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   410
PWM (Da):   %s   44822.8  
PI (pH):   %s   5.54
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSSRGRNLLL CAIFLPLLVS AMQQPLVPGL DDIINHPPQN LDDVARIIRG IEGGESLPGL LQPGMQKPKG DGEEQGQSNP AVPKPADGSK NRAQQQQQQE PIPLAHIPKP KPGALVEGFY  QQSCPQAEKI VSEVINTNFQ KDPTFAPALI RLFFHDCFIT GCDASILLDR TPTGGPVEKE APQNGKFVRG FEPLDEAKAR LESECPGVVS CADLLAFANR DSLVFTGVPT YPVPAGRRDS  RASLMKDAED GLPFPETTSR EMIRMFEVRD LTVEEMVVLI GAHSVGSAHC TVVAGRFRDP GKTAAIDRGY LMKMQVMTAC VNETQELAFD PLTQQKMDSR FYKEMLKNRS LLESDQNLVN 
EPSANVIMRK YADDQKGWLE KFVAAVIKVG GLGVLTGDQG EIRRQCRVVN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Intron 1 and long PS.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCTCCA GAGGGAGGAA TCTTCTTTTG TGCGCAATAT TCCTCCCGTT GCTGGTCTCC GCAATGCAAC AACCGCTTGT CCCAGGCCTT GACGACATCA TCAACCACCC ACCACAAAAT  CTCGACGACG TTGCCAGAAT CATAAGGGGC ATCGAGGGCG GTGAGTCACT CCCGGGCCTG CTCCAGCCTG GTATGCAGAA GCCCAAAGGA GATGGGGAAG AACAAGGTCA AAGTAACCCG  GCAGTCCCCA AGCCCGCGGA TGGGTCCAAA AACAGAGCCC AACAACAACA ACAACAGGAG CCGATACCGT TGGCCCATAT ACCCAAGCCC AAGCCAGGGG CACTGGTAGA GGGATTCTAC  CAGCAGAGCT GCCCGCAGGC CGAGAAGATC GTTAGCGAGG TTATTAACAC CAACTTCCAG AAGGACCCGA CTTTTGCTCC GGCTCTCATC CGCCTGTTTT TCCACGATTG TTTCATCACG  GGCTGCGACG CCTCGATCCT ACTAGACCGG ACCCCCACTG GCGGGCCCGT GGAGAAAGAG GCCCCACAGA ACGGAAAGTT TGTCCGGGGT TTCGAGCCCC TCGACGAGGC CAAGGCGCGG  CTCGAGTCCG AGTGCCCCGG CGTGGTCTCG TGCGCGGACC TCCTCGCCTT CGCGAACCGC GACTCCCTCG TCTTCACGGG GGTCCCGACC TACCCTGTCC CCGCAGGCCG GCGGGACTCA  CGGGCCTCCC TAATGAAGGA TGCCGAGGAC GGGCTTCCGT TTCCCGAGAC AACGTCCCGG GAGATGATAC GTATGTTCGA GGTCAGGGAT TTGACCGTGG AGGAGATGGT CGTGCTTATC  GGGGCCCACT CGGTTGGGTC GGCCCACTGC ACGGTTGTGG CCGGGAGGTT TCGGGACCCA GGAAAGACGG CGGCGATCGA CCGAGGCTAC TTGATGAAGA TGCAGGTGAT GACGGCGTGC  GTGAACGAGA CGCAGGAACT GGCGTTCGAC CCGCTCACGC AGCAAAAGAT GGACTCGAGG TTCTATAAGG AGATGCTTAA GAACCGGTCA CTGCTGGAGT CGGACCAGAA CCTGGTGAAC  GAGCCGAGCG CGAATGTTAT CATGAGGAAG TACGCGGACG ATCAGAAAGG ATGGCTGGAG AAGTTTGTGG CGGCTGTTAT TAAAGTGGGG GGACTCGGGG TGCTCACGGG GGATCAAGGG 
GAGATAAGGA GACAGTGTCG GGTCGTTAAC TGA 

Retrieve as FASTA