Entry information : SaAPx05
Entry ID 16031
Creation 2019-11-27 (Christophe Dunand)
Last sequence changes 2019-11-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-12-10 (Christophe Dunand)
Peroxidase information: SaAPx05
Name SaAPx05
Class Ascorbate peroxidase    [Orthogroup: APx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaAPx05
start..stop
S start..stop
MguAPx05 560 0 1..348 1..344
NtAPx09-1A 521 0 4..348 2..346
VvAPx07 519 0 4..348 3..344
CclAPx01 516 0 5..348 4..349
Literature and cross-references SaAPx05
Protein ref. GenBank:   GER52538 [Incorrect prediction]
Protein sequence: SaAPx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   348
PWM (Da):   %s   37811.45  
PI (pH):   %s   8.99
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVTVSFISSA PSMASLVQSP STSARRKFSR RSQSTINCRA EAETLDDERL SRRRALQCFT AATVSVDLIG RSTSLIEVAH AADLIQRQQR SQFQSKIKGI LATALKGNPD LIPSVLTLAL  NDAVTYDKAT KSGGPNGSIR FSSEISRPEN KNLAAALSLL EDAKKEIDSV SKGGPISYAD LIQYAAQSAA KSTFLASAIR KCGGNEEKGA LLYTAYGSSG QWGLFDRQFG RSDAEQPDPE 
GRVPQWEKST VEEMKNKFSA IGFGPRQLAV MSAFLGPDQS ANEALLASDP DVLPWVQKYQ RSRETVSQTD YEVDLITTLT KLSSLGQQIN YEAYTYPVKR VDLSKLKL 

Retrieve as FASTA  
Remarks Complete sequence from genomic; Uncorrect prediction from NCBI: two miss prediction of exon.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTAACCG TATCTTTCAT CTCATCCGCT CCTTCGATGG CGTCTCTGGT CCAGTCGCCG TCTACCTCCG CCCGCCGGAA ATTCTCGCGC CGTTCTCAGA GCACCATAAA TTGCAGAGCT  GAAGCTGAAA CCCTCGACGA CGAACGCCTC TCACGCCGCC GTGCTCTGCA ATGCTTTACT GCTGCCACCG TCAGCGTGGA CTTGATAGGA AGATCCACCT CGTTAATTGA AGTGGCTCAT  GCAGCTGACT TGATACAACG CCAACAACGC TCACAATTTC AGTCCAAAAT TAAGGGAATC CTTGCGACAG CACTGAAGGG GAATCCAGAT CTCATCCCAT CTGTATTAAC TTTAGCGCTT  AATGATGCTG TAACTTACGA TAAGGCAACA AAATCTGGAG GTCCCAATGG CTCGATACGG TTTAGCTCAG AGATCAGCCG ACCAGAAAAT AAAAATCTGG CTGCTGCTCT AAGTTTGTTG  GAGGATGCAA AGAAGGAAAT AGATTCTGTA TCCAAAGGTG GACCAATATC ATATGCAGAT CTCATCCAAT ATGCAGCTCA AAGTGCTGCC AAATCTACCT TTCTTGCCTC CGCCATCCGG  AAATGTGGTG GAAATGAAGA GAAAGGGGCA TTACTCTACA CTGCATATGG CTCAAGTGGG CAGTGGGGCC TCTTTGACCG GCAGTTTGGG AGGTCAGATG CAGAACAACC CGACCCAGAA  GGAAGGGTTC CTCAGTGGGA GAAATCCACC GTTGAGGAAA TGAAAAATAA GTTCTCCGCT ATCGGTTTTG GGCCCCGCCA GCTAGCTGTC ATGTCAGCAT TCTTGGGTCC CGACCAGTCG  GCAAACGAGG CATTGCTAGC TTCTGATCCG GATGTTCTGC CATGGGTTCA GAAATATCAA CGCAGCCGTG AAACAGTATC ACAAACTGAT TATGAGGTTG ACCTCATAAC CACGCTGACA 
AAACTGAGTT CCTTGGGCCA GCAAATCAAT TACGAGGCTT ATACATATCC AGTCAAAAGG GTTGATCTCA GCAAACTCAA ATTGTAG 

Retrieve as FASTA