Entry information : SaPrx27-2
Entry ID 16034
Creation 2019-12-03 (Christophe Dunand)
Last sequence changes 2019-12-03 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2019-12-03 (Christophe Dunand)
Peroxidase information: SaPrx27-2
Name SaPrx27-2
Class Class III peroxidase     [Orthogroup: Prx233]*
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SaPrx27-2
start..stop
S start..stop
SaPrx28 400 5e-142 1..252 75..327
VvPrx55 276 3e-93 1..252 73..321
CanPrx18 272 1e-91 1..252 75..324
PvPrx06 271 2e-91 1..252 72..320
Literature and cross-references SaPrx27-2
Protein ref. GenBank:   GER50901.1 [Incorrect prediction]
Protein sequence: SaPrx27-2
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   252
PWM (Da):   %s   27877.84  
PI (pH):   %s   8.05
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCDASVLLKD TSTFTGEQSA TPNKNSIRKL EVIDQIKSEV ETKCPGMVSC ADILAIAARD AVDILSGNKV CYMVEMGRLD STTANKTAAN NLIPPPTSSI SDLITNFKNH GLTETDLVLL  AGAHTIGKAR CTSFKNRLYN ETNSLDKNFA NNLRRICSPD DSKTGNNTAD LDYQTPNVFD NHYYQNIIAN KTLLHSDHQL LNNSDTKYLV SKYSNDNVGF SREFGQAMIN MGRLKRTAGE 
KMEIRKTCWK QN* 

Retrieve as FASTA  
Remarks Partial sequence from genomic. Exon 1 is missing due to N in the sequence. Two CIII Prx ORF in one prediction (GER50901.1).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GGATGTGACG CATCAGTCCT TCTAAAAGAC ACATCGACTT TCACGGGAGA GCAATCCGCG ACGCCCAATA AGAACTCCAT TAGAAAACTT GAAGTAATCG ACCAAATCAA GTCGGAGGTA  GAGACCAAAT GCCCGGGAAT GGTCTCTTGT GCCGATATCT TGGCCATTGC TGCTCGGGAT GCTGTTGATA TCGTAAGCTA TCCAGACTTT CTGACCAAAA AAAAAAAATA AAAATACTTT  AGGCGAACTT TTTTGTTTGA ACAATGTTTA TTTGGATAGA TCATTTTACA TAAACTTTGT TCGATACAGC TAACACATAA TTTTTTATAG TTAGAATTAC AATAACCGAT GAATGATACG  AAAATTTTAC AGCTTAGCGG CAATAAGGTA TGTTACATGG TGGAAATGGG ACGATTGGAC TCCACAACCG CAAACAAAAC TGCAGCAAAC AACTTAATTC CTCCTCCGAC TTCGAGTATT  AGTGACCTTA TCACAAACTT CAAAAATCAC GGACTTACCG AAACGGACCT TGTTCTTCTC GCGGGTTCGA CTCTTGTATA AATAAACTCC ATTTAAATGA ACGGTTAATT TTTTAGCTAA  TTACATTATA TGTTATATGT ATATATAGGC GCTCACACGA TTGGGAAAGC AAGATGCACG AGCTTCAAGA ATCGGTTATA CAATGAGACC AATAGCCTCG ACAAAAATTT CGCCAATAAT  CTACGTAGAA TCTGCTCGCC AGATGATAGT AAAACCGGAA ACAACACGGC CGATTTGGAT TACCAAACGC CAAATGTTTT TGACAATCAT TATTACCAAA ACATTATCGC TAATAAGACT  TTGCTCCACT CGGATCACCA ATTGCTCAAT AACAGTGACA CCAAATATCT CGTCAGTAAA TATAGCAATG ATAATGTTGG ATTTTCCAGA GAATTTGGTC AAGCGATGAT CAATATGGGA 
CGCCTTAAGC GTACCGCAGG GGAGAAGATG GAGATACGGA AAACGTGTTG GAAGCAGAAT TAG 

Retrieve as FASTA