Entry information : SaAPx[P]08
Entry ID 16038
Creation 2019-12-10 (Christophe Dunand)
Last sequence changes 2019-12-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Peroxidase information: SaAPx[P]08
Name SaAPx[P]08
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Orobanchaceae Striga
Organism Striga asiatica (witchweed)    [TaxId: 4170 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value SaAPx[P]08
start..stop
S start..stop
VvAPx02 380 4e-136 1..217 1..220
LeAPx04 380 6e-136 1..217 1..220
CanAPx04 379 1e-135 1..217 1..220
QshAPx01 379 2e-135 1..217 1..220
Literature and cross-references SaAPx[P]08
Protein ref. GenBank:   GER28675.1 [Incorrect prediction]
Protein sequence: SaAPx[P]08
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   221
PWM (Da):   %s   24534.79  
PI (pH):   %s   7.25
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVKKYPVVSD EYRAAVEKCK KKLKGLIAEK HCAPIILWHS GGTYDWKTKT GGPFGTIRNP AELSHEANNG LDIAVRLLEP LKEQFRILSY TDFYQLAGVV AVEVTGGPEI PFHPGRQEKT 
ELPPEGRLPD AKKGPDHLRD VLGHMGLSDK DIVALFGGHT LGRCHKERSG FEGPWTPNPL IFDNSYFKEL LSGEKEGLIQ LPSDKALLDD PIFRPLLRDM L 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Uncorrect prediction from NCBI (splecing) and last exon is missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGAAGA AGTATCCGGT GGTGAGTGAC GAGTATCGGG CGGCGGTGGA GAAATGCAAG AAGAAGCTCA AAGGGCTTAT TGCAGAGAAA CACTGCGCTC CGATCATACT ATGGCACTCA  GGTGGGACAT ATGATTGGAA AACAAAGACT GGAGGGCCGT TTGGGACAAT TAGGAACCCA GCTGAGCTTT CACATGAAGC TAACAATGGG CTTGACATTG CTGTTAGGCT GCTGGAGCCA  TTAAAGGAAC AATTCCGTAT CCTCAGCTAC ACAGACTTTT ACCAGCTGGC TGGTGTTGTT GCCGTTGAGG TAACAGGAGG GCCGGAGATT CCTTTCCATC CTGGAAGACA GGAAAAAACA  GAACTCCCAC CTGAAGGCCG CTTACCTGAT GCAAAGAAAG GTCCAGACCA TTTGAGAGAT GTTTTGGGGC ATATGGGACT AAGCGACAAA GATATTGTTG CTTTGTTTGG TGGTCATACC  CTGGGTAGGT GCCATAAGGA AAGATCTGGA TTTGAGGGAC CGTGGACCCC TAATCCGCTT ATATTCGATA ACTCTTACTT CAAGGAACTT CTTAGTGGGG AGAAAGAAGG TCTCATCCAG 
CTGCCATCTG ACAAAGCTTT ATTGGATGAT CCTATTTTCC GACCTCTTTT GAGAGATATG CTG 

Retrieve as FASTA