Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
228 (210) |
| PWM (Da): |
24130.94 (22052.9) |
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| PI (pH): |
5.55 (4.97) |
Peptide Signal: |
cut: 19 range:19-228 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFKSFVAFL CIALAAHATT TGRVKCPDGN CEDAIAFSPA LEYQGLPAGG LNFHANLGIS DSVELLTPFL HNHTQVSAGD LIQFAAAVAI GNCPGAPKLE FMARRPNATA PAPDGLIPEP
QDSVDKIFAR TKDGGNFSPD EVVVLLASHS IARADHVDPS IKAVPFDSTP FTFNTQAFLE VLLKGTGFPG SPNNTGQFTS GKPNSMRISD DGCWTGRVRW RGDTGDSW*
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Retrieve as FASTA
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| Remarks |
Probably pseudogene; shorter sequence and missing fragment. fgenesh1_pm.222_#_5 |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTTCA AGTCTTTCGT TGCTTTCCTC TGCATTGCCC TTGCTGCTCA CGCCACGACC ACTGGCCGTG TCAAGTGTCC AGATGGCAAT GTAGCTTCCC ATTCTGCTTG CTGCCCGTTT
TTCACCCTTC GCAATGACCT GCAAAATAAC ACGTAAGGTG TTGCTTCTGG GTTGCACAGC TCAGTTAGCT GATCAATTAT TTAGTTTTTC ATACCAGTGC GGTGAGGACA CTCATGAGAC
AGTTCATCTC AGTTTCCGTT ATTAGACCAT TTCCAGATGA CGGTGGTGTA CATTTACTTA CTCTAGCATT CTTCTCTTTC AGAAGATGCC ATTGCATTCT CGCCAGCCCT AGAATATCAG
GGGCTTCCAG CTGGTGGAGT TGCCGACGGT TCTATGCTTA CTTTCCCCAA CTCAAGCTGA ATTTCCACGC AAACCTCGGG ATTTCTGACA GCGTTGAACT ACTTACCCCC TTCCTCCACA
ACCACACCCA GGTCTCTGCA GGTGACCTCA TTCAATTCGC TGCTGCCGTT GCTATTGGCA ACTGTCCTGG TGCTCCCAAG TTGGAATTCA TGGCCAGGCG TCCGAATGCC ACAGCCCCTG
CCCCTGATGG TCTAATCCCT GAACCCCAGG ACTCAGTCGA TAAGATCTTT GCCCGTACAA AGGATGGTGG AAACTTCTCA CCTGATGAAG TGGTCGTCTT GCTAGCATCC CACTCCATTG
CGAGAGCAGA TCACGTTGAC CCCTCAATCA AGGCTGTTCC CTTTGACTCG ACGCCTTTCA CCTTCAACAC TCAAGCTTTC CTCGAGGTTT TGCTGAAGGG TACTGGATTC CCCGGAAGTC
CAAACAACAC TGGTCAGTTT ACATCAGGAA AACCGAACAG CATGTATATA CCGTACATAC GATATATATG TCTGAGACCA CGGCTACATG AGCCCCGGTC TGAGACACTG CAGACCCCCC
CTATTGTATG TACAGTATAA CTGATCTGGG ATTGCTATAT TGTACATACT GTATATACCG TATATACCAT ACATAGATGC CAAACCTTGT AAATTATTAC TACAGTGTAC ATAGTGTATA
TATTGTATAG ACAGCATACT ACGGAGTAGG AATCTTAATA ATAATATCAC TTTAAATAAT TCAAGTGAAC ATTTGACCAA GATATTGTTA TTATTGCTAG CACTAGTAGT ACTAGCAGTA
TCGGATTACC CTACTGGCTT ATACTACCAA ATGATTAATT CAAGCTCATG TACTAGTAGA GCTAGTAGCT GTCGTATGCA CAGCCACCAT GGTGTGCGCG AAGTCTTCCA AACTTTCTTC
ATCATCAAAG GAAACATAGT TGTCATATGG ACTTACCGAC CCTTATCCCA CAAACGTTCT GCAATGCGAT GCAGTCATCC AGATGACTCG ATGAGAACAC ACGAAGGGAC TCCATATATG
TGGTGTAATG CGATCCATAC GCCTTCACTT CAAGTGTTGG TGACTTGCCA CAATTGGAAG GATCCAGGGT AGCAACTTCT ACGTCGAGTG AATAATGTAT CTATCGCAGT TCAACTTCAG
TCACAAAATA TAGATAAAAT AAACAACTTA CTGCCACACA GGCAAAACCA ATGACCGGAA GGGGTACAGG ACAGAACGAA CGAGGTGAAG CAGCAGCAAG CAATGTTGTT CCAGTGAACC
CGATGTGGAG GACGGCCATC TCTAAAGAGG GGTGATTGAA CCGACCAGTC CTGGCCGGTT TCTAGGAAAG TAATATTGAG CAGATAACAT AGCGTGAAGA TGGAGGCTTA CCCCCATTTG
CCCTGTTACT ATCTCACCCT CTGCGCAGAA TCCAACCTGT CCGTAGAGAA AATTGCCGTT CTTTGCCAGG TTCGCAGCGA TGGTCTTCCT GAGCTGTAGG CTTGCATATT GTTCAAGGTG
AAATGAAGGG ATGATTTGGA GGCCAATCTT TCGCACATGT GCACTGTGCC CGCCCATTTC TGATAAACTG CATGTGAGAT GACAAAAATC AGTAGATAAC AAGTAAGAGA TAAGACATTG
ACTTACATAT TGCCGAACAT GCTCATTAGC TGGTATAATC GTCAAGGTGT TGCAGATCTC CTGTGCGCAG GACCATGCGT CTGGCTGTCC ATTGTGTTGT GATACCAGCT ACCTCCGGAA
ACATGTGCTC GAGGACTAGG TTGGACTTGA ACATCACGTT GCCTGCTACA AGTTGACTCC TCATGGGGGG AGGGGCTGAA CTCAACGTTT TGCCATCCCA TGTAATGTTT TCATCAGGAG
AATCAGTGAT GATGGGTGCT GGACTGGCAG GGTAAGATGG AGGGGTGATA CTGGAGATAG CTGGTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTTCA AGTCTTTCGT TGCTTTCCTC TGCATTGCCC TTGCTGCTCA CGCCACGACC ACTGGCCGTG TCAAGTGTCC AGATGGCAAT TGCGAAGATG CCATTGCATT CTCGCCAGCC
CTAGAATATC AGGGGCTTCC AGCTGGTGGA CTGAATTTCC ACGCAAACCT CGGGATTTCT GACAGCGTTG AACTACTTAC CCCCTTCCTC CACAACCACA CCCAGGTCTC TGCAGGTGAC
CTCATTCAAT TCGCTGCTGC CGTTGCTATT GGCAACTGTC CTGGTGCTCC CAAGTTGGAA TTCATGGCCA GGCGTCCGAA TGCCACAGCC CCTGCCCCTG ATGGTCTAAT CCCTGAACCC
CAGGACTCAG TCGATAAGAT CTTTGCCCGT ACAAAGGATG GTGGAAACTT CTCACCTGAT GAAGTGGTCG TCTTGCTAGC ATCCCACTCC ATTGCGAGAG CAGATCACGT TGACCCCTCA
ATCAAGGCTG TTCCCTTTGA CTCGACGCCT TTCACCTTCA ACACTCAAGC TTTCCTCGAG GTTTTGCTGA AGGGTACTGG ATTCCCCGGA AGTCCAAACA ACACTGGTCA GTTTACATCA
GGAAAACCGA ACAGCATGAG AATCAGTGAT GATGGGTGCT GGACTGGCAG GGTAAGATGG AGGGGTGATA CTGGAGATAG CTGGTGA
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Retrieve as FASTA
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