Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
382 (363) |
| PWM (Da): |
39600.58 (37565.5) |
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| PI (pH): |
4.2 (4.15) |
Peptide Signal: |
cut: 20 range:20-382 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSFKTLLAFI GISVASVQAA TLGKRGVTCP DGSTTSNEAC CAFFPLLEDL QTNLFGGNCG EDVHETLRIS FHDAIAFSKS LGPSAGGGAD GSMLIFPNVE PNFVANAGIS DSVAFLTPFL
QRHNTISAGD LIQFGAAAAI TNCPGAPQLE FLAGRPNATA PAIDGLIPEP QDSVDSIFAR MEDGGNFSPP EVVALLTSHT IARSDHVVPS SQQVPFDSTP FTFDSQIFVE VLLKGTGFPG
NGSADDVGTG EVESPLPLGS GADIGELRLQ SDFAIARDAR TACTWQGFVN EQEKMAGAFK TAMAKLAIIG QDRSKLIDCS DVIPKPVPAT GKPATFPATK TIADIDQSCA ESPFPSLATD
PGATQSLIPN CPNDASTCII LA*
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Retrieve as FASTA
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| Remarks |
5 MnP in the scaffold_28
fgenesh1_kg.28_#_532_#_Locus13945v2rpkm0.79 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTTCA AAACTCTCCT TGCTTTCATC GGTATCTCCG TGGCATCTGT CCAAGCCGCA ACCCTTGGCA AGAGGGGCGT GACCTGCCCT GATGGCTCTA CGACCTCCAA CGAGGCGTGC
TGCGCGTTCT TCCCTCTTCT CGAGGACCTC CAAACGAACC TGTGAGCAGC TCCATAGGGT AAACTTTTTT GTAGTCACTC GCTGACCATG CTCAAGGTTT GGCGGCAACT GTGGTGAGGA
CGTCCACGAG ACACTGCGTA TTAGCTTCCG TGAGCTCCAA TCACAAGCAC CAATCTCCCT TGACTGATCA GTTTCATTGA AGACGACGCC ATTGCGTTCT CGAAGTCTCT AGGACCGTCA
GCCGGTGGAG GTGCTGATGG GTCCATGCTC ATCTTCCCCA ACGTCGAGCC CAACTTCGTG GCGAACGCTG GTATCAGTGA CAGTGTTGCT TTCCTGACCC CCTTCCTCCA AAGGCACAAC
ACCATCAGTG CCGGTGACTT GATCCAGTTT GGTGCTGCCG CCGCCATCAC CAACTGCCCG GGTGCACCCC AACTTGAGTT CTTGGCAGGA CGTCCCAATG CTACCGCCCC TGCCATCGAC
GGACTGATTC CCGAGCCCCA AGACTCCGTC GACAGTATCT TCGCCCGCAT GGAAGATGGC GGAAACTTCT CCCCCCCTGA GGTCGTTGCC TTGCTGACAT CCCACACCAT CGCGCGTTCG
GACCACGTCG TCCCTAGTTC ACAACAGGTT CCCTTTGACT CGACGCCCTT CACTTTCGAC TCCCAGATCT TCGTCGAGGT GCTGCTCAAG GGAACCGGAT TCCCCGGAAA CGGCTCCGCT
GACGACGTCG GCCTCGGTAT GATTCACCTC TGTAGACATC TATTGACGCT AATGTATTCT ACCCCAGGTG AGGTGGAGTC CCCCCTCCCA CTGGGCTCTG GTGCCGACAT TGGCGAACTC
CGTTTGCAGT CAGACTTCGC CATCGCTCGT GGTAAGTGTG TCTCAAGTGC TAAGTGACCC TGACAAACCT GTTCCCAAAG ACGCCAGGAC CGCATGCACG TGGCAAGGCT TCGTCAACGA
GCAGGAGAAG ATGGCCGGCG CCTTCAAGAC TGCCATGGCT AAGCTGGCTA TCATTGGCCA GGACCGATCC AAACTCATCG ACTGCTCTGA CGTCATTCCC AAACCCGTCC CTGCGACGGG
CAAGCCTGCC ACGTGAGTAA TCATCTTTCC TATGGAGGAT CCGAGTTGAT CGTGTCGCCC GTGTGTAGAT TCCCTGCCAC AAAAACAATC GCCGACATTG ACCAGTCATG CGCCGAATCT
CCCTTCCCGA GCCTTGCCAC CGATCCCGGT GCGACACAGT CCCTGATCCC GTACGTGGCC GTCTATAGCC TGTCATGAAG TACACACACT GACCATGCGG ATTCCAGTAA CTGCCCGAAC
GATGCGTCGA CCTGTATCAT TTTGGCATAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTTCA AAACTCTCCT TGCTTTCATC GGTATCTCCG TGGCATCTGT CCAAGCCGCA ACCCTTGGCA AGAGGGGCGT GACCTGCCCT GATGGCTCTA CGACCTCCAA CGAGGCGTGC
TGCGCGTTCT TCCCTCTTCT CGAGGACCTC CAAACGAACC TGTTTGGCGG CAACTGTGGT GAGGACGTCC ACGAGACACT GCGTATTAGC TTCCACGACG CCATTGCGTT CTCGAAGTCT
CTAGGACCGT CAGCCGGTGG AGGTGCTGAT GGGTCCATGC TCATCTTCCC CAACGTCGAG CCCAACTTCG TGGCGAACGC TGGTATCAGT GACAGTGTTG CTTTCCTGAC CCCCTTCCTC
CAAAGGCACA ACACCATCAG TGCCGGTGAC TTGATCCAGT TTGGTGCTGC CGCCGCCATC ACCAACTGCC CGGGTGCACC CCAACTTGAG TTCTTGGCAG GACGTCCCAA TGCTACCGCC
CCTGCCATCG ACGGACTGAT TCCCGAGCCC CAAGACTCCG TCGACAGTAT CTTCGCCCGC ATGGAAGATG GCGGAAACTT CTCCCCCCCT GAGGTCGTTG CCTTGCTGAC ATCCCACACC
ATCGCGCGTT CGGACCACGT CGTCCCTAGT TCACAACAGG TTCCCTTTGA CTCGACGCCC TTCACTTTCG ACTCCCAGAT CTTCGTCGAG GTGCTGCTCA AGGGAACCGG ATTCCCCGGA
AACGGCTCCG CTGACGACGT CGGCACCGGT GAGGTGGAGT CCCCCCTCCC ACTGGGCTCT GGTGCCGACA TTGGCGAACT CCGTTTGCAG TCAGACTTCG CCATCGCTCG TGACGCCAGG
ACCGCATGCA CGTGGCAAGG CTTCGTCAAC GAGCAGGAGA AGATGGCCGG CGCCTTCAAG ACTGCCATGG CTAAGCTGGC TATCATTGGC CAGGACCGAT CCAAACTCAT CGACTGCTCT
GACGTCATTC CCAAACCCGT CCCTGCGACG GGCAAGCCTG CCACATTCCC TGCCACAAAA ACAATCGCCG ACATTGACCA GTCATGCGCC GAATCTCCCT TCCCGAGCCT TGCCACCGAT
CCCGGTGCGA CACAGTCCCT GATCCCTAAC TGCCCGAACG ATGCGTCGAC CTGTATCATT TTGGCATAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAATTGTATT GCCCGGATGC CAAGGCTGTG AAAGTTCTGT ATGCTTACTC GACCATTGGT TACCAAGACA TTGCCGCGTC TCATTGGCGG GAGGCCGCCA CGAACACAAC TTCAACGGTC
AGCATGAGCT TCAAAACTCT CCTTGCTTTC ATCGGTATCT CCGTGGCATC TGTCCAAGCC GCAACCCTTG GCAAGAGGGG CGTGACCTGC CCTGATGGCT CTACGACCTC CAACGAGGCG
TGCTGCGCGT TCTTCCCTCT TCTCGAGGAC CTCCAAACGA ACCTGTTTGG CGGCAACTGT GGTGAGGACG TCCACGAGAC ACTGCGTATT AGCTTCCACG ACGCCATTGC GTTCTCGAAG
TCTCTAGGAC CGTCAGCCGG TGGAGGTGCT GATGGGTCCA TGCTCATCTT CCCCAACGTC GAGCCCAACT TCGTGGCGAA CGCTGGTATC AGTGACAGTG TTGCTTTCCT GACCCCCTTC
CTCCAAAGGC ACAACACCAT CAGTGCCGGT GACTTGATCC AGTTTGGTGC TGCCGCCGCC ATCACCAACT GCCCGGGTGC ACCCCAACTT GAGTTCTTGG CAGGACGTCC CAATGCTACC
GCCCCTGCCA TCGACGGACT GATTCCCGAG CCCCAAGACT CCGTCGACAG TATCTTCGCC CGCATGGAAG ATGGCGGAAA CTTCTCCCCC CCTGAGGTCG TTGCCTTGCT GACATCCCAC
ACCATCGCGC GTTCGGACCA CGTCGTCCCT AGTTCACAAC AGGTTCCCTT TGACTCGACG CCCTTCACTT TCGACTCCCA GATCTTCGTC GAGGTGCTGC TCAAGGGAAC CGGATTCCCC
GGAAACGGCT CCGCTGACGA CGTCGGCACC GGTGAGGTGG AGTCCCCCCT CCCACTGGGC TCTGGTGCCG ACATTGGCGA ACTCCGTTTG CAGTCAGACT TCGCCATCGC TCGTGACGCC
AGGACCGCAT GCACGTGGCA AGGCTTCGTC AACGAGCAGG AGAAGATGGC CGGCGCCTTC AAGACTGCCA TGGCTAAGCT GGCTATCATT GGCCAGGACC GATCCAAACT CATCGACTGC
TCTGACGTCA TTCCCAAACC CGTCCCTGCG ACGGGCAAGC CTGCCACATT CCCTGCCACA AAAACAATCG CCGACATTGA CCAGTCATGC GCCGAATCTC CCTTCCCGAG CCTTGCCACC
GATCCCGGTG CGACACAGTC CCTGATCCCT AACTGCCCGA ACGATGCGTC GACCTGTATC ATTTTGGCAT AGGTCCCCTC CCTCGCTGGC GGCCGGACAT AGTAGCAAAT GGTTCGATAT
TTAACTCCAG GCCGACCACA AGCGTTTTCT TTCGTGGTTT AT
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Retrieve as FASTA
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