Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
380 (361) |
| PWM (Da): |
39070.26 (37083.1) |
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| PI (pH): |
4.12 (4.07) |
Peptide Signal: |
cut: 20 range:20-380 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSFKTLLALI GVSVASVQAA TLAKKSSVTC PDGSTTANEA CCAFFPLLQD LQTNLFGGNC GEDVHETLRI SFHDAIAFSK SLGPSAGGGA DGSMIIFPNV EPNFVANAGI SDSVGFLTPF
LQRHNTISAG DLIQFGAAAA ITNCPGAPQL EFLAGRPNAT APAIDGLIPE PQDSVTSILA RMADGGDFSP AEVVALLSSH TIARSDTVVP GSMQVPFDTT PFTFDTQIFV EVLLNGTGFP
GNGSVGTGEV ESPLPLGSGA DVGEIRLQSD FAIARDSRTA CTWQSFVNEQ EKMADAFKSA MAKMALIGQD RSALIDCSDV IPQPVPASGK AATFPATKTI ADIDQSCASS PFPSLATDPG
ATQSLIPNCP NDASSCIILA *
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Retrieve as FASTA
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| Remarks |
fgenesh1_kg.395_#_12_#_Locus13945v2rpkm0.79 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTTCA AAACCCTCCT TGCTCTCATC GGTGTCTCCG TGGCATCTGT CCAGGCCGCA ACCCTTGCCA AGAAGAGCTC GGTGACCTGT CCTGATGGCT CTACGACCGC CAACGAGGCG
TGCTGCGCAT TCTTCCCTCT TCTCCAGGAT CTCCAAACCA ACCTGTAAGC AGCCCCGTAG GGTGACATTT TTTATGGTCG CTCGCTGACC ATGCTCAAGG TTTGGCGGCA ACTGTGGTGA
GGATGTCCAC GAGACACTGC GTATTAGCTT CCGTGAGCTC CAATCCCAAA CACCAATCTC CCTTGACTGA TCAGTCCATT AAAGACGACG CCATTGCGTT CTCGAAGTCC CTAGGGCCGT
CCGCCGGTGG AGGTGCTGAT GGGTCCATGA TCATCTTCCC CAACGTCGAG CCCAACTTCG TGGCGAACGC TGGTATCAGT GACAGTGTTG GTTTCCTGAC CCCCTTCCTC CAAAGGCACA
ACACCATCAG TGCTGGTGAC TTAATCCAGT TTGGTGCTGC CGCCGCCATC ACCAACTGCC CGGGTGCACC CCAACTTGAG TTCTTGGCCG GACGTCCCAA TGCTACTGCC CCTGCCATCG
ACGGACTGAT TCCCGAGCCC CAAGACTCCG TCACCAGTAT CTTAGCCCGC ATGGCTGATG GTGGAGACTT CTCCCCCGCT GAGGTCGTTG CCTTGCTGTC ATCCCACACC ATCGCGCGTT
CGGACACCGT CGTCCCTGGT TCAATGCAGG TTCCATTTGA CACCACGCCC TTCACTTTTG ACACCCAGAT CTTCGTCGAG GTGCTACTCA ACGGAACCGG ATTCCCCGGA AACGGCTCCG
TCGGCACCGG TATGATTCAC CTCTGTACCG ACATCTATTG ACGCTAATAT ATTCTACCCC AGGTGAGGTG GAGTCCCCCC TCCCACTGGG GTCTGGTGCC GACGTTGGCG AAATCCGTTT
GCAGTCAGAC TTCGCCATCG CTCGTGGTAA GTGCCTCTCA AGTGCTAAGT GACCCTGACA AACCTGTTCC CAAAGACTCT AGGACCGCAT GCACGTGGCA AAGCTTCGTC AACGAGCAGG
AGAAGATGGC CGACGCCTTC AAGAGTGCCA TGGCTAAGAT GGCTCTTATT GGCCAGGACC GATCCGCACT CATCGACTGC TCTGACGTCA TTCCCCAACC CGTCCCTGCG TCGGGCAAGG
CTGCCACGTG AGTAATCATC TTTCCTATAG AGGATCCGAG TCGATCGTAT CGCCCGTGTG TAGATTCCCT GCCACAAAAA CAATAGCCGA CATTGACCAG TCGTGTGCCT CCTCTCCCTT
CCCGAGTCTT GCCACCGACC CCGGTGCGAC TCAGTCCCTG ATCCCGTGAG TGGCCGTCTA TAGCCTGTCA CGAAGTTACA CAAACTGACC ATGCGGATTG CAGCAATTGC CCGAACGATG
CGTCGAGCTG TATCATTTTG GCATAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGCTTCA AAACCCTCCT TGCTCTCATC GGTGTCTCCG TGGCATCTGT CCAGGCCGCA ACCCTTGCCA AGAAGAGCTC GGTGACCTGT CCTGATGGCT CTACGACCGC CAACGAGGCG
TGCTGCGCAT TCTTCCCTCT TCTCCAGGAT CTCCAAACCA ACCTGTTTGG CGGCAACTGT GGTGAGGATG TCCACGAGAC ACTGCGTATT AGCTTCCACG ACGCCATTGC GTTCTCGAAG
TCCCTAGGGC CGTCCGCCGG TGGAGGTGCT GATGGGTCCA TGATCATCTT CCCCAACGTC GAGCCCAACT TCGTGGCGAA CGCTGGTATC AGTGACAGTG TTGGTTTCCT GACCCCCTTC
CTCCAAAGGC ACAACACCAT CAGTGCTGGT GACTTAATCC AGTTTGGTGC TGCCGCCGCC ATCACCAACT GCCCGGGTGC ACCCCAACTT GAGTTCTTGG CCGGACGTCC CAATGCTACT
GCCCCTGCCA TCGACGGACT GATTCCCGAG CCCCAAGACT CCGTCACCAG TATCTTAGCC CGCATGGCTG ATGGTGGAGA CTTCTCCCCC GCTGAGGTCG TTGCCTTGCT GTCATCCCAC
ACCATCGCGC GTTCGGACAC CGTCGTCCCT GGTTCAATGC AGGTTCCATT TGACACCACG CCCTTCACTT TTGACACCCA GATCTTCGTC GAGGTGCTAC TCAACGGAAC CGGATTCCCC
GGAAACGGCT CCGTCGGCAC CGGTGAGGTG GAGTCCCCCC TCCCACTGGG GTCTGGTGCC GACGTTGGCG AAATCCGTTT GCAGTCAGAC TTCGCCATCG CTCGTGACTC TAGGACCGCA
TGCACGTGGC AAAGCTTCGT CAACGAGCAG GAGAAGATGG CCGACGCCTT CAAGAGTGCC ATGGCTAAGA TGGCTCTTAT TGGCCAGGAC CGATCCGCAC TCATCGACTG CTCTGACGTC
ATTCCCCAAC CCGTCCCTGC GTCGGGCAAG GCTGCCACAT TCCCTGCCAC AAAAACAATA GCCGACATTG ACCAGTCGTG TGCCTCCTCT CCCTTCCCGA GTCTTGCCAC CGACCCCGGT
GCGACTCAGT CCCTGATCCC CAATTGCCCG AACGATGCGT CGAGCTGTAT CATTTTGGCA TAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CAATTGTATT GCCCGGATAC CAAGGCTGTG AAAGTTCTGT ATGCTTACTC GACTATTGGT TACCAAGACT TTGCCGAGTC TCATTGGCGA GAGTACCACA GCAGGCAGAA CAGTCGTCAA
CGTTCAACGG TCAACATGAG CTTCAAAACC CTCCTTGCTC TCATCGGTGT CTCCGTGGCA TCTGTCCAGG CCGCAACCCT TGCCAAGAAG AGCTCGGTGA CCTGTCCTGA TGGCTCTACG
ACCGCCAACG AGGCGTGCTG CGCATTCTTC CCTCTTCTCC AGGATCTCCA AACCAACCTG TTTGGCGGCA ACTGTGGTGA GGATGTCCAC GAGACACTGC GTATTAGCTT CCACGACGCC
ATTGCGTTCT CGAAGTCCCT AGGGCCGTCC GCCGGTGGAG GTGCTGATGG GTCCATGATC ATCTTCCCCA ACGTCGAGCC CAACTTCGTG GCGAACGCTG GTATCAGTGA CAGTGTTGGT
TTCCTGACCC CCTTCCTCCA AAGGCACAAC ACCATCAGTG CTGGTGACTT AATCCAGTTT GGTGCTGCCG CCGCCATCAC CAACTGCCCG GGTGCACCCC AACTTGAGTT CTTGGCCGGA
CGTCCCAATG CTACTGCCCC TGCCATCGAC GGACTGATTC CCGAGCCCCA AGACTCCGTC ACCAGTATCT TAGCCCGCAT GGCTGATGGT GGAGACTTCT CCCCCGCTGA GGTCGTTGCC
TTGCTGTCAT CCCACACCAT CGCGCGTTCG GACACCGTCG TCCCTGGTTC AATGCAGGTT CCATTTGACA CCACGCCCTT CACTTTTGAC ACCCAGATCT TCGTCGAGGT GCTACTCAAC
GGAACCGGAT TCCCCGGAAA CGGCTCCGTC GGCACCGGTG AGGTGGAGTC CCCCCTCCCA CTGGGGTCTG GTGCCGACGT TGGCGAAATC CGTTTGCAGT CAGACTTCGC CATCGCTCGT
GACTCTAGGA CCGCATGCAC GTGGCAAAGC TTCGTCAACG AGCAGGAGAA GATGGCCGAC GCCTTCAAGA GTGCCATGGC TAAGATGGCT CTTATTGGCC AGGACCGATC CGCACTCATC
GACTGCTCTG ACGTCATTCC CCAACCCGTC CCTGCGTCGG GCAAGGCTGC CACATTCCCT GCCACAAAAA CAATAGCCGA CATTGACCAG TCGTGTGCCT CCTCTCCCTT CCCGAGTCTT
GCCACCGACC CCGGTGCGAC TCAGTCCCTG ATCCCCAATT GCCCGAACGA TGCGTCGAGC TGTATCATTT TGGCATAGGT CCCCTCTCTG GCGGTCTGAC ATAGTAGCAA ATGGTTCGAT
ATTTAACTCC AGGCCGACCA CAAGCATATT TTTTCGTGGT TTATCCGTCT TTCCTTAGCT TCTGTGATCT ATGTGTGGAA TATCTTTAAT ATACCAAATT GC
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Retrieve as FASTA
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