Entry information : CcampPrx[P]05(Cuscam_OOIL01000558.1_FGenesh32.1/31.1)
Entry ID 16083
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-01-13 (Christophe Dunand)
Peroxidase information: CcampPrx[P]05(Cuscam_OOIL01000558.1_FGenesh32.1/31.1)
Name CcampPrx[P]05(Cuscam_OOIL01000558.1_FGenesh32.1/31.1)
Class Class III peroxidase     [Orthogroup: Prx017]*
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx[P]05
start..stop
S start..stop
CcampPrx27 619 0 1..307 17..329
CcampPrx17 616 0 1..307 17..329
InPrx03 495 7e-179 1..300 18..323
NtPrx08-1B 494 2e-178 3..300 21..324
Literature and cross-references CcampPrx[P]05(Cuscam_OOIL01000558.1_FGenesh32.1/31.1)
Protein sequence: CcampPrx[P]05(Cuscam_OOIL01000558.1_FGenesh32.1/31.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   307
PWM (Da):   %s   34005.83  
PI (pH):   %s   5.12
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AEIADLRRGF YNQTCPEAES VVRLVMEKSM RREARSIASV MRLQFHDCFV NGCDGSVLLD DTETMLGEKL SLRSYEVVDE IKEELERACP GVVSCADILI MAARDAVALS GGPNWEVKLG  RLDSLTASQE DSDSIMPSPR ANATYLINLF TKFNLSVQDL VALSGSHSLG KGRCFSVVFR LYNQSGTGRP DPAMDYEFRE KLDKLCPLGG DGNVTGDLDA TPEVFDNQYF VDLTRGRGFL 
NSDETLFTTP RTRGYVRLYS RDQKAFFDAF VEGMVKMGDL RSGRPGEVRR NCRVANGHLP PRNSFAS 

Retrieve as FASTA  
Remarks Two independent prediction from FGeneSH (Cuscam_OOIL01000558.1_FGenesh32.1 (only exon 1) and 31.1 (exon 3 and 4). Short PS is missing and frame shift in the exon 2
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCTGAGATCG CGGATCTCCG CCGCGGATTT TACAACCAGA CCTGCCCGGA GGCCGAATCC GTGGTCAGGC TGGTGATGGA GAAGAGCATG AGAAGAGAAG CCAGAAGCAT AGCATCCGTG  ATGCGCCTCC AGTTCCACGA TTGCTTTGTT AACGGATGTG ACGGATCGGT ACTGTTGGAC GACACGGAGA CAATGTTGGG GGAGAAGCTG TCTTTGTCGA ACATAAAATC ACTGAGCTGG  GAGGGTGTAC AAAGTGGCCA ACCGTCATAT GAAGTTGTTG ATGAAATCAA GGAAGAGCTG GAGAGGGCGT GTCCGGGCGT TGTTTCGTGC GCTGATATCT TAATCATGGC GGCCAGAGAT  GCTGTTGCTC TGAGTGGAGG ACCAAATTGG GAGGTGAAGC TGGGAAGGCT GGACAGCTTA ACAGCAAGCC AAGAAGACTC AGACAGCATA ATGCCAAGCC CAAGAGCAAA TGCAACATAT  CTCATAAACC TCTTCACCAA ATTCAACCTC TCAGTGCAAG ACCTTGTTGC CCTTTCAGGC TCCCATTCCC TTGGCAAGGG ACGGTGCTTC TCGGTCGTCT TCCGCCTCTA CAACCAGTCG  GGGACCGGGA GACCGGACCC CGCCATGGAC TACGAGTTCC GCGAGAAGCT CGACAAGCTG TGCCCCCTCG GGGGCGACGG GAACGTCACG GGGGACTTGG ACGCGACCCC CGAGGTGTTT  GACAACCAGT ACTTTGTGGA CTTGACTAGG GGACGGGGGT TTCTAAACTC GGACGAAACA CTGTTCACTA CCCCGAGAAC CCGGGGGTAC GTCCGGCTGT ACAGCCGAGA CCAGAAGGCA  TTCTTTGATG CATTCGTCGA GGGGATGGTT AAGATGGGCG ATCTCCGGTC AGGCCGGCCC GGAGAGGTCA GAAGGAACTG CAGAGTTGCC AATGGCCACT TGCCCCCAAG AAACTCCTTT 
GCTTCCTAA 

Retrieve as FASTA