Entry information : CcampPrx[P]18(Cuscam_OOIL01000102.1_FGenesh86.1)
Entry ID 16095
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2020-01-14 (Christophe Dunand)
Peroxidase information: CcampPrx[P]18(Cuscam_OOIL01000102.1_FGenesh86.1)
Name CcampPrx[P]18(Cuscam_OOIL01000102.1_FGenesh86.1)
Class Class III peroxidase     [Orthogroup: Prx015]*
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx[P]18
start..stop
S start..stop
CcampPrx56 377 6e-134 16..199 135..318
InPrx09 305 7e-106 16..199 133..316
CroPrx43 290 3e-100 16..199 82..265
GhPrx23 289 2e-99 16..199 134..317
Literature and cross-references CcampPrx[P]18(Cuscam_OOIL01000102.1_FGenesh86.1)
Protein sequence: CcampPrx[P]18(Cuscam_OOIL01000102.1_FGenesh86.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   199
PWM (Da):   %s   21433.64  
PI (pH):   %s   9.73
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDEPHPRGSL QTRSDGGPYW EVPKGRKDGR VSKASETIQL PAPAFNLSQL YLSFSLRGLS MEDLVALSGG HTIGFSHCSS FNNRLRNFNA TSDVDPTLNR AMAAQLRRIC PPGGNSKNAG 
TGMDPSSTTF DNNYYKLVLQ GKGLFSSDQA LLANPKTRAL VLQYASSQEA FFKAFANSMI KMSSITGGEG VRTDCRVSN 

Retrieve as FASTA  
Remarks pseudogene from genomic. Exons 1 and 2 are missing.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATGAGC CTCATCCCCG AGGGTCCCTT CAGACTCGGT CAGATGGGGG GCCTTATTGG GAGGTCCCAA AGGGACGAAA AGATGGGCGG GTTTCGAAAG CTAGTGAAAC CATACAATTG  CCTGCCCCAG CCTTTAACCT CTCTCAGCTA TACCTTAGCT TCTCTCTCAG AGGTCTCTCC ATGGAGGACC TTGTGGCTCT CTCAGGCGGG CACACGATAG GTTTCTCCCA TTGCTCATCC  TTCAACAATC GGTTGCGCAA CTTCAACGCA ACCAGTGACG TGGACCCCAC GCTCAACCGT GCCATGGCAG CCCAGCTGAG ACGCATTTGT CCGCCGGGAG GCAATTCCAA GAACGCCGGA  ACGGGAATGG ATCCTTCTTC AACGACCTTT GACAATAACT ATTACAAGCT GGTTTTGCAA GGGAAGGGTC TGTTCTCCTC GGACCAGGCC CTGCTTGCAA ATCCCAAAAC TAGAGCCCTT  GTTTTGCAAT ATGCTAGCTC ACAAGAAGCT TTCTTTAAGG CCTTTGCAAA TTCCATGATC AAGATGAGCA GCATCACAGG GGGTGAAGGT GTTAGAACTG ATTGTAGGGT ATCTAATTAG 

Retrieve as FASTA