Entry information : CcampPrx23(Cuscam_OOIL01000047.1_FGenesh415.1)
Entry ID 16101
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-15 (Christophe Dunand)
Peroxidase information: CcampPrx23(Cuscam_OOIL01000047.1_FGenesh415.1)
Name CcampPrx23(Cuscam_OOIL01000047.1_FGenesh415.1)
Class Class III peroxidase    [Orthogroup: Prx107]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx23
start..stop
S start..stop
CcampPrx28 679 0 1..358 1..359
CcampPrx25 544 0 19..358 19..358
CcampPrx29 541 0 19..358 20..359
IbPrx01 514 0 3..351 2..351
Literature and cross-references CcampPrx23(Cuscam_OOIL01000047.1_FGenesh415.1)
Protein sequence: CcampPrx23(Cuscam_OOIL01000047.1_FGenesh415.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   358
PWM (Da):   %s   37430.88  
PI (pH):   %s   7.87
Sequence
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Send to Peroxiscan
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MAASFVTRLS LGISIIALTL AGYSIYQNTQ TAINKATSPT WLADTFGEEP AAASILSLGS GKVSDEACIF SAVREVVDAA VDAEARMGAS LIRLFFHDCF VDGCDAGLLL KDTPTFIGEQ  SAGANQNSVR GYEVIDRAKQ NAKTKCPDTP VSCADIVSIA ARDSFHKFTG KTYTVTLGRK DARTANLTGA NTQLVGPAED LASQTRKFAA KGFNQTEMVA LLGSHTIGFV RCPLLCVAAV 
INPARAAAAA VQCNCQTTPN ATGLVGLDPT PAAFDQRYYA DVANGRGLLF SDNELMKGST TGAAVRRYRD AMGAFLADFA AAMVKMSNLP PSRGVQLEIR DVCSRVNGNK VAAGVASL 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (exon was not predicted).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGGCTT CCTTTGTGAC TCGGCTAAGC CTGGGCATAA GCATAATAGC ACTAACCCTA GCAGGCTACT CTATTTACCA AAATACCCAA ACGGCCATCA ACAAGGCCAC CAGTCCGACG  TGGCTGGCCG ACACTTTCGG GGAAGAGCCG GCGGCGGCGA GCATTCTCTC GCTAGGTTCC GGCAAGGTTT CCGACGAGGC ATGCATATTC TCCGCCGTCA GAGAAGTGGT GGACGCCGCC  GTCGATGCGG AAGCTCGGAT GGGTGCCTCT CTCATTCGCC TCTTCTTCCA TGACTGCTTT GTAGACGGCT GCGATGCAGG TCTTCTTTTG AAGGATACCC CGACTTTCAT CGGAGAACAG  AGTGCCGGCG CCAACCAAAA CTCCGTTAGA GGTTATGAAG TTATAGACAG GGCCAAACAG AACGCCAAAA CTAAATGTCC CGACACCCCC GTGTCGTGCG CTGACATTGT CTCCATTGCT  GCTCGTGATT CTTTCCACAA ATTCACCGGC AAAACATACA CGGTGACTCT AGGTAGAAAG GATGCAAGAA CGGCCAACCT CACCGGAGCT AACACCCAGC TTGTCGGTCC GGCGGAGGAC  TTGGCTTCAC AGACCAGAAA ATTCGCCGCG AAGGGATTTA ACCAAACGGA GATGGTGGCG TTATTAGGTT CCCACACGAT CGGGTTCGTG AGATGCCCGC TTTTATGCGT CGCCGCCGTG  ATCAATCCGG CTCGTGCGGC GGCTGCCGCC GTGCAATGCA ACTGCCAAAC GACCCCGAAC GCCACGGGCC TGGTCGGCCT GGACCCCACT CCTGCGGCTT TCGACCAACG CTATTATGCC  GACGTGGCTA ACGGTCGCGG CCTCTTGTTT TCGGACAATG AGCTGATGAA GGGAAGCACG ACCGGCGCCG CCGTCAGGCG GTACAGGGAC GCCATGGGCG CATTTCTGGC CGATTTCGCG 
GCGGCGATGG TGAAGATGAG CAACCTGCCG CCGTCCCGCG GCGTGCAGCT TGAGATCCGG GATGTTTGTA GCCGAGTGAA TGGTAATAAA GTCGCCGCCG GCGTTGCATC TCTGTAA 

Retrieve as FASTA