Entry information : CcampPrx25(Cuscam_OOIL01000047.1_FGenesh417.1)
Entry ID 16103
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-15 (Christophe Dunand)
Peroxidase information: CcampPrx25(Cuscam_OOIL01000047.1_FGenesh417.1)
Name CcampPrx25(Cuscam_OOIL01000047.1_FGenesh417.1)
Class Class III peroxidase    [Orthogroup: Prx106]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx25
start..stop
S start..stop
CcampPrx29 686 0 1..357 2..358
CcampPrx23 551 0 1..358 1..358
IbPrx01 530 0 9..352 8..350
CcampPrx28 528 0 1..358 1..359
Literature and cross-references CcampPrx25(Cuscam_OOIL01000047.1_FGenesh417.1)
Protein sequence: CcampPrx25(Cuscam_OOIL01000047.1_FGenesh417.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   358
PWM (Da):   %s   37769.96  
PI (pH):   %s   5.81
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSSIGSVLS LALSLIALTL AGYSIYQNTH TAIIEGLQLN KAITDTLDES PENMLVLPPL DESSGMLSDE ACVFSAVKEV VVAAINKEAR MGASLIRLFF HDCFVDGCDA GLLLKDTPTF  TGEQTAGGNN NSVRGFEVID NAKQNAKTKC PDTPVSCADI LSIAARDSFQ KFTGKTYAVS LGRKDARTAN FTGANTQLVG PSENLASQVK KFADKGFNQT ELVALLGSHT IGFARCPLLC 
VSSFVNPARA STLQCNCQTT PNATGLVGLD PTPVKFDQRY YSDVASGRGL LFSDNELMKG NTTSAAVKRY RDAMDSFLAD FAAAMVKMSK LPPSPGVQLE IRDVCSKVNA NSAGVASV 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (intron is missing probably due tu a extra gat the splicing site)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTAGTT CTATTGGGAG TGTGCTCAGC CTAGCACTAA GCCTCATAGC ACTAACCCTT GCCGGTTACT CTATTTACCA AAACACCCAC ACGGCCATTA TTGAGGGCCT GCAGCTTAAT  AAGGCTATTA CCGACACTTT GGATGAGTCG CCGGAGAACA TGCTAGTTCT GCCGCCGCTC GATGAATCCT CCGGCATGCT TTCCGACGAA GCGTGTGTAT TCTCCGCCGT CAAAGAAGTG  GTGGTCGCCG CCATTAACAA GGAGGCTCGG ATGGGTGCCT CTCTCATCCG TCTTTTCTTT CATGACTGTT TTGTCGACGG TTGCGACGCA GGGCTTCTTC TAAAGGATAC CCCGACTTTC  ACCGGCGAAC AGACTGCCGG CGGCAACAAT AACTCCGTCA GAGGTTTTGA GGTTATAGAC AACGCCAAAC AGAACGCAAA AACCAAATGC CCCGACACCC CCGTCTCTTG CGCAGACATT  CTTTCCATCG CTGCCCGCGA TTCCTTCCAA AAGTTCACGG GAAAAACGTA CGCAGTGAGT CTTGGCAGAA AAGATGCAAG AACGGCGAAC TTCACCGGAG CTAATACACA ACTCGTCGGG  CCATCGGAGA ACTTGGCGTC GCAGGTGAAG AAATTCGCCG ACAAAGGGTT TAACCAAACG GAGTTGGTGG CGCTGTTAGG CTCACACACA ATAGGGTTCG CCAGATGCCC GCTCCTATGC  GTCAGCTCAT TCGTGAACCC GGCTCGGGCC TCCACGTTGC AATGCAATTG CCAGACGACC CCGAACGCCA CGGGACTGGT CGGTCTCGAC CCCACTCCCG TGAAGTTCGA CCAGCGTTAC  TACTCCGACG TGGCCAGCGG TCGGGGCCTT TTGTTCTCAG ACAATGAGCT GATGAAGGGG AACACCACCA GCGCCGCCGT GAAGCGGTAC CGGGACGCCA TGGACTCTTT CCTGGCCGAC 
TTCGCGGCGG CGATGGTGAA GATGAGCAAG CTGCCGCCGT CCCCCGGAGT CCAGCTCGAA ATCCGGGATG TATGCAGCAA GGTGAATGCC AACTCCGCCG GCGTTGCATC CGTCTGA 

Retrieve as FASTA