Entry information : CcampPrx29(Cuscam_OOIL01000034.1_FGenesh536.1)
Entry ID 16107
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-13 (Christophe Dunand)
Peroxidase information: CcampPrx29(Cuscam_OOIL01000034.1_FGenesh536.1)
Name CcampPrx29(Cuscam_OOIL01000034.1_FGenesh536.1)
Class Class III peroxidase    [Orthogroup: Prx107]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx29
start..stop
S start..stop
CcampPrx25 686 0 2..358 1..357
CcampPrx23 546 0 2..359 1..358
IbPrx01 528 0 10..353 8..350
CcampPrx28 523 0 2..359 1..359
Literature and cross-references CcampPrx29(Cuscam_OOIL01000034.1_FGenesh536.1)
Protein sequence: CcampPrx29(Cuscam_OOIL01000034.1_FGenesh536.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   359
PWM (Da):   %s   37849.15  
PI (pH):   %s   7.2
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMGGSIGSVL SLALSLIALT LAGYSIYQNT HTAIIEGLQL NKVITDTLDE SPENMLVLPP LDKSSGKLSD EACVFSAVKE VVVAAINKEA RMGASLIRLF FHDCFVDGCD AGLLLKDTPT  FTGEQTAIGN NNSVRGFEVI DNAKQNAKTK CPDTPVSCAD ILSIAARDSF QKFTGKTYTV SLGRKDARTA NFTGANTQLV GPSETLASQV KKFADKGFNQ TELVALLGSH TIGFARCPLL 
CVSSFVNPAR ASALQCNCQT TPNATGLVGL DPTPAKFDQR YYSDVASGRG LLFSDNELMK GNATSAAVKR YRDAMDSFLA DFAAAMVKMS KLPPSPGVPL EIRDVCSKVN ANSAGVASF 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGenSH (exon 1 is missing).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATGGGTG GTTCTATTGG GAGTGTGCTC AGCCTAGCAC TAAGCCTCAT AGCACTAACC CTTGCCGGCT ACTCAATTTA CCAAAACACC CACACGGCCA TTATTGAGGG CCTGCAGCTT  AATAAGGTTA TTACCGACAC TTTGGATGAG TCGCCGGAGA ACATGCTTGT TCTGCCGCCG CTCGATAAAT CTTCCGGCAA GCTTTCCGAC GAAGCGTGTG TATTCTCCGC CGTCAAAGAA  GTGGTGGTCG CCGCCATTAA CAAGGAGGCT CGGATGGGTG CCTCTCTCAT CCGTCTTTTC TTCCATGACT GTTTTGTCGA TGGTTGCGAC GCAGGGCTTC TTCTAAAGGA TACCCCGACT  TTCACCGGCG AACAGACTGC CATCGGCAAC AATAACTCCG TCAGAGGTTT TGAGGTCATA GACAATGCCA AACAGAACGC AAAAACCAAA TGCCCCGACA CCCCTGTCTC TTGCGCAGAC  ATTCTTTCCA TCGCTGCCCG CGATTCCTTC CAAAAGTTCA CGGGAAAAAC ATACACAGTG AGTCTTGGCA GAAAAGATGC AAGAACGGCG AACTTCACCG GAGCTAATAC CCAACTCGTC  GGGCCGTCGG AGACCTTGGC GTCGCAGGTG AAGAAGTTCG CCGACAAAGG GTTTAACCAA ACGGAGTTGG TGGCGCTGTT GGGCTCGCAC ACAATAGGGT TCGCCAGATG CCCGCTCCTA  TGCGTCAGCT CGTTCGTGAA CCCGGCCCGG GCCTCCGCGT TGCAATGCAA CTGCCAGACA ACCCCGAACG CCACGGGACT GGTCGGCCTG GACCCCACAC CCGCGAAGTT CGACCAGCGT  TACTACTCCG ACGTGGCAAG CGGCCGGGGC CTTTTGTTCT CCGACAATGA GCTGATGAAG GGGAACGCCA CCAGCGCCGC CGTGAAGAGG TACCGGGACG CCATGGACTC TTTCCTGGCC  GACTTTGCGG CGGCCATGGT GAAGATGAGC AAGCTGCCGC CGTCCCCCGG GGTCCCGCTC GAAATCCGGG ATGTTTGCAG CAAGGTGAAT GCCAACTCCG CCGGTGTTGC ATCCTTCTGA 

Retrieve as FASTA