Entry information : CcampPrx36(Cuscam_OOIL01000272.1_FGenesh127.1)
Entry ID 16114
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-18 (Christophe Dunand)
Peroxidase information: CcampPrx36(Cuscam_OOIL01000272.1_FGenesh127.1)
Name CcampPrx36(Cuscam_OOIL01000272.1_FGenesh127.1)
Class Class III peroxidase    [Orthogroup: Prx015]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx36
start..stop
S start..stop
NtPrx81-1A 490 2e-176 5..322 2..320
LePrx99 486 5e-175 1..322 1..322
GhPrx05 461 3e-165 2..323 4..323
LePrx63 461 3e-165 2..322 1..320
Literature and cross-references CcampPrx36(Cuscam_OOIL01000272.1_FGenesh127.1)
Protein sequence: CcampPrx36(Cuscam_OOIL01000272.1_FGenesh127.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323
PWM (Da):   %s   34215.13  
PI (pH):   %s   4.89
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MIGAVFLVLI VTMTKLAGGG AQLKVGFYDE TCPNFESIVG GVIRDVAATN PNISPALLRL HFHDCFVHGC DGSILVDNGA ASERHAFGHQ GVGGFEVIER AKAEVEAVCP GVVSCADIVA  LAAREAVVLT NGASYEVETG RRDGAVSNLT LADDMPDIDD SIQTLKDKFL NKGLSNKDLV LLSAAHTIGT TACFFMTKRL YSFSPSGGGS DPAINPSFLD ELKAKCPENG DVNVRLPIDH 
GSGQTFDTQI LQNIRTGFAV LQSDARLYED SSTRNVVDSY FGFLPFLGPS FETEFGNAMV KMGRIGVLTG SQGTIRRVCG SFN 

Retrieve as FASTA  
Remarks Complete seuqnec from genomic. Incorrect prediction from FGeneSH (Exons 3 and 4 were not predicted).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATAGGTG CAGTTTTCTT GGTCCTCATC GTGACCATGA CCAAATTGGC CGGCGGCGGG GCGCAGCTGA AGGTGGGCTT CTACGACGAG ACCTGCCCCA ACTTCGAGTC CATCGTCGGC  GGCGTAATCC GGGACGTCGC CGCCACGAAC CCCAACATTT CCCCGGCCCT GCTCCGCCTC CACTTCCACG ACTGCTTCGT CCACGGGTGC GACGGGTCGA TACTGGTGGA CAACGGGGCG  GCGTCGGAGA GGCACGCGTT TGGGCACCAA GGGGTCGGCG GATTTGAGGT GATTGAGAGG GCCAAGGCGG AGGTGGAGGC CGTCTGCCCC GGCGTTGTTT CTTGTGCCGA TATTGTCGCC  TTGGCCGCCC GAGAAGCCGT CGTCTTGACA AATGGGGCGT CGTACGAGGT GGAGACGGGA AGAAGGGACG GAGCGGTGTC AAATTTGACA CTGGCGGATG ACATGCCGGA CATTGATGAT  TCCATCCAGA CACTCAAGGA CAAGTTCCTC AACAAAGGAC TTTCCAATAA AGACCTTGTC CTCCTCAGCG CGGCGCACAC GATTGGAACC ACAGCGTGCT TCTTCATGAC CAAGCGCCTC  TACAGCTTCT CCCCCAGCGG CGGCGGATCC GATCCGGCGA TCAATCCGTC GTTTCTCGAC GAGCTAAAGG CCAAGTGCCC GGAGAACGGC GACGTCAACG TCCGCCTGCC CATTGACCAC  GGCAGCGGTC AGACGTTCGA CACCCAAATA CTGCAGAACA TCCGGACCGG GTTCGCGGTT CTACAGTCCG ACGCCCGGTT GTACGAGGAC TCGTCTACCC GGAATGTGGT GGATTCTTAC  TTTGGCTTTT TACCGTTTTT GGGGCCCTCT TTTGAGACGG AGTTTGGAAA TGCGATGGTA AAAATGGGGA GAATCGGCGT GCTTACCGGC TCTCAAGGTA CCATTAGGCG GGTGTGTGGA 
TCTTTTAATT GA 

Retrieve as FASTA