Entry information : CcampPrx43(Cuscam_OOIL01000318.1_FGenesh59.1)
Entry ID 16121
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-14 (Christophe Dunand)
Peroxidase information: CcampPrx43(Cuscam_OOIL01000318.1_FGenesh59.1)
Name CcampPrx43(Cuscam_OOIL01000318.1_FGenesh59.1)
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx43
start..stop
S start..stop
CcampPrx55 495 8e-179 5..310 23..326
AtrPrx67 441 2e-157 3..310 9..313
PcoPrx01 434 9e-155 6..310 17..321
InPrx06 433 3e-154 5..310 9..318
Literature and cross-references CcampPrx43(Cuscam_OOIL01000318.1_FGenesh59.1)
Protein sequence: CcampPrx43(Cuscam_OOIL01000318.1_FGenesh59.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   311
PWM (Da):   %s   33219.26  
PI (pH):   %s   7.72
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAALFFFSVL IFAAATTSAQ MSTNFYDWSC PTALSIIKNA VASAVKKEAR MGASLLRLHF HDCFGCDGSI LLNDNSTFTG EKTAPPNRGS VRGYNVIDNI KTQLENTCPG VVSCADIVAV  AARDSVVALG GLSWDLQLGR RDSTTANNSA VISNIPGPAF NLSQLVSSFS KKGFSTREMV VLSGGHTIGN ARCTTFRNHI YNDTNIEPTF ASSLKANCPQ SGGDNNLSPL DNTPTTFDNA 
YFVNLQSKKG VFHSDQELFN GGSTDSIVNT YSSNPSTFAS EFAKDMLKMS NLSPLTGSNG EIRTKCWKTN N 

Retrieve as FASTA  
Remarks Complete sequence from genomic incorrect prediction from FGeneSH (exon 1 is missing)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGGCAC TCTTCTTCTT CTCCGTCCTA ATCTTTGCGG CCGCCACGAC CTCCGCTCAG ATGTCTACAA ATTTCTACGA TTGGTCGTGC CCGACCGCCC TTTCCATAAT AAAGAATGCG  GTGGCATCCG CCGTGAAAAA GGAGGCTCGG ATGGGAGCGT CCTTGCTTCG TCTTCATTTC CACGACTGCT TTGGTTGTGA TGGATCAATT TTGTTGAATG ACAACTCAAC CTTCACTGGT  GAGAAAACTG CGCCACCAAA TAGAGGATCC GTGAGGGGAT ACAACGTGAT TGACAACATT AAAACTCAAC TCGAGAACAC TTGTCCCGGT GTTGTATCTT GTGCTGATAT TGTTGCCGTT  GCCGCTCGAG ACTCTGTGGT TGCGCTTGGT GGCCTTAGCT GGGACCTGCA ACTAGGTAGG AGAGATTCAA CCACTGCAAA TAACAGTGCA GTTATCAGTA ACATTCCCGG ACCAGCATTC  AACTTGAGTC AACTCGTTTC TTCTTTCTCC AAAAAAGGCT TTTCAACAAG AGAAATGGTT GTCCTATCAG GAGGGCACAC AATAGGGAAT GCTAGGTGCA CGACATTCCG GAATCATATC  TACAATGACA CGAATATAGA GCCCACATTT GCTAGCTCAT TGAAAGCAAA TTGTCCTCAA AGCGGGGGTG ACAACAACCT TTCCCCACTC GACAATACTC CAACTACGTT CGACAATGCT  TATTTTGTGA ACTTGCAGAG TAAAAAAGGA GTTTTCCATT CCGACCAGGA ACTCTTCAAC GGAGGTTCCA CGGACTCCAT TGTCAACACT TATAGCTCCA ACCCATCTAC CTTTGCTTCC 
GAATTCGCAA AAGATATGCT AAAAATGAGT AACCTTAGCC CTCTCACGGG CTCTAATGGC GAGATCAGGA CGAAGTGTTG GAAAACCAAC AATTGA 

Retrieve as FASTA