Entry information : CcampPrx50(Cuscam_OOIL01000272.1_FGenesh143.1)
Entry ID 16128
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-18 (Christophe Dunand)
Peroxidase information: CcampPrx50(Cuscam_OOIL01000272.1_FGenesh143.1)
Name CcampPrx50(Cuscam_OOIL01000272.1_FGenesh143.1)
Class Class III peroxidase    [Orthogroup: Prx105]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx50
start..stop
S start..stop
CcampPrx52 644 0 1..320 1..320
MePrx31 479 2e-172 10..320 10..321
CanPrx01 477 2e-171 14..320 19..332
StPrx28 476 5e-171 1..320 1..331
Literature and cross-references CcampPrx50(Cuscam_OOIL01000272.1_FGenesh143.1)
Protein sequence: CcampPrx50(Cuscam_OOIL01000272.1_FGenesh143.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320
PWM (Da):   %s   33951.16  
PI (pH):   %s   7.34
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKGFLHNTAV LACFLVLATG ALGQGTTVGF YRSTCPTAES VVRATVASHY RSDPTVAPGL LRMIFHDCFV HGCDASVLIS GPNSERTAGP NLRLRGFEVI DDAKAQLEAA CPGVVSCADI  LALAARDSAV LTGGLGWEVP TGRRDGRVSL AADTANLPGF TDSVDVQKQK FADKGLNTQD LVSLVGAHTI GTAACQFFSY RLFNATADPP VDPSFLPTLQ ALCPQGGDGN RRVPLDDGSV 
GAFDNSYFVN LQKGRGVLES DQRLWADSST KTFVQRFLGL RGFLGLRLNY EFGRSMVKMS NIEVKTGSDG EIRKVCSAIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (extra sequence between exons 2 and 3).
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGGGCT TTCTTCACAA CACGGCGGTT TTGGCCTGTT TCTTGGTGCT GGCCACCGGG GCACTAGGCC AAGGCACGAC CGTCGGGTTC TACCGCTCCA CGTGCCCGAC GGCGGAGTCG  GTAGTGAGAG CGACGGTGGC GTCGCATTAC CGGTCGGACC CCACGGTTGC CCCCGGGTTG CTGAGAATGA TCTTCCACGA CTGCTTCGTC CACGGGTGTG ATGCCTCGGT TCTCATCAGC  GGCCCGAACT CCGAGAGAAC CGCGGGGCCC AACCTGCGGC TCAGAGGGTT CGAGGTCATC GACGACGCCA AAGCGCAGCT CGAAGCTGCT TGCCCTGGCG TCGTTTCTTG TGCGGACATT  CTCGCACTTG CGGCACGTGA CTCTGCTGTG CTGACCGGCG GGCTAGGTTG GGAAGTGCCG ACGGGACGGC GGGACGGGAG GGTGTCGCTG GCGGCGGATA CGGCGAACCT GCCGGGATTT  ACAGACTCCG TTGACGTCCA GAAGCAAAAG TTCGCTGACA AAGGCCTCAA CACCCAAGAT CTCGTTTCCC TCGTAGGGGC ACACACGATT GGAACAGCAG CTTGCCAGTT TTTCAGCTAC  AGACTATTCA ACGCCACCGC AGATCCTCCG GTGGACCCAT CTTTCCTCCC TACACTTCAA GCCCTCTGTC CCCAAGGCGG CGACGGAAAC CGGCGCGTCC CCCTCGACGA CGGCAGTGTC  GGCGCGTTCG ACAACTCCTA CTTCGTCAAC CTCCAAAAGG GCCGCGGCGT CCTCGAGTCC GACCAAAGAT TGTGGGCCGA CAGTTCCACC AAAACTTTCG TGCAGCGCTT CTTGGGCCTC  AGAGGGTTTC TTGGGCTTAG GCTCAACTAT GAGTTCGGGC GGTCCATGGT GAAGATGAGT AACATTGAGG TTAAAACTGG GAGTGACGGT GAAATTCGCA AAGTCTGCTC AGCAATTAAT 
TAA 

Retrieve as FASTA