Entry information : CcampPrx52(Cuscam_OOIL01000034.1_FGenesh838.1)
Entry ID 16130
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-13 (Christophe Dunand)
Peroxidase information: CcampPrx52(Cuscam_OOIL01000034.1_FGenesh838.1)
Name CcampPrx52(Cuscam_OOIL01000034.1_FGenesh838.1)
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx52
start..stop
S start..stop
CcampPrx50 644 0 1..320 1..320
MePrx31 483 5e-174 11..320 5..321
CanPrx01 481 4e-173 11..320 16..332
StPrx28 481 9e-173 1..320 1..331
Literature and cross-references CcampPrx52(Cuscam_OOIL01000034.1_FGenesh838.1)
Protein sequence: CcampPrx52(Cuscam_OOIL01000034.1_FGenesh838.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320
PWM (Da):   %s   34041.16  
PI (pH):   %s   7.29
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKGFLYNTAV LVCFLVLATG ALGQGTTVGF YRSTCPTAES VVRATVASHY RSDPTVAPGL LRMIFHDCFV HGCDASVLIS GPNSERTAGP NLRLRGFEVI DDAKTQLEAA CPGVVSCADI  LALAARDSAV LTGGLGWEVP TGRRDGRVSL AADTANLPGF TDSVDVQKQK FADKGLNTQD LVSLVGAHTI GTAACQFFSY RLFNATADPP VDPSFLPTLQ ALCPQGGDGN RRVPLDDGSV 
GAFDNSYFAN LQKGRGVLES DQRLWADSST KTFVQRFLGL RGFLGLRFNY EFGRSMVKMS NIEVKTGSDG EIRKVCSAIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FgeneSH (extra seq at the exon2/3 junction)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGGGCT TTCTTTACAA CACGGCGGTT TTGGTCTGTT TCTTGGTGCT GGCCACCGGG GCACTTGGCC AAGGCACGAC CGTCGGGTTC TACCGCTCCA CGTGCCCGAC GGCAGAGTCG  GTAGTGAGAG CGACGGTGGC GTCGCATTAC CGGTCTGACC CCACGGTTGC CCCCGGGTTG CTGAGAATGA TCTTCCACGA CTGCTTCGTC CACGGTTGTG ATGCCTCGGT TCTCATCAGT  GGCCCCAACT CTGAGAGAAC CGCGGGGCCC AACCTGCGGC TCAGAGGGTT CGAGGTCATC GACGATGCCA AAACGCAGCT CGAAGCTGCT TGCCCTGGCG TCGTTTCTTG TGCTGACATT  CTCGCACTTG CGGCACGTGA CTCTGCTGTG CTGACCGGCG GGCTAGGTTG GGAGGTGCCG ACGGGACGGC GGGACGGGAG GGTGTCGCTG GCGGCGGATA CGGCGAACCT GCCGGGATTT  ACAGACTCCG TTGACGTCCA GAAGCAAAAG TTTGCTGACA AAGGCCTCAA TACTCAAGAT CTCGTTTCGC TCGTGGGGGC ACACACGATT GGAACAGCAG CTTGTCAGTT TTTCAGCTAC  AGACTATTCA ACGCCACCGC AGATCCTCCG GTAGACCCAT CTTTCCTCCC TACACTTCAG GCTCTCTGTC CCCAAGGCGG CGATGGAAAC CGACGCGTCC CCCTCGACGA CGGCAGCGTC  GGCGCGTTCG ACAACTCCTA CTTCGCCAAC CTCCAAAAGG GCCGCGGCGT CCTCGAGTCC GACCAAAGAT TGTGGGCCGA CAGCTCCACC AAAACTTTCG TGCAGCGCTT CTTGGGCCTC  AGAGGGTTTC TTGGGCTTAG GTTCAACTAT GAGTTCGGGC GGTCCATGGT GAAGATGAGT AACATTGAGG TTAAAACTGG GAGTGACGGT GAAATTCGCA AAGTCTGCTC AGCTATTAAT 
TAA 

Retrieve as FASTA