Entry information : CcampPrx55(Cuscam_OOIL01000318.1_FGenesh72.1)
Entry ID 16133
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-14 (Christophe Dunand)
Peroxidase information: CcampPrx55(Cuscam_OOIL01000318.1_FGenesh72.1)
Name CcampPrx55(Cuscam_OOIL01000318.1_FGenesh72.1)
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx55
start..stop
S start..stop
CcampPrx43 495 8e-179 23..326 5..310
InPrx06 469 2e-168 15..326 6..318
EcamPrx21 461 4e-165 32..326 22..319
EcamPrx22 460 1e-164 32..326 22..319
Literature and cross-references CcampPrx55(Cuscam_OOIL01000318.1_FGenesh72.1)
Protein sequence: CcampPrx55(Cuscam_OOIL01000318.1_FGenesh72.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326
PWM (Da):   %s   34083.63  
PI (pH):   %s   6.76
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAATGVYSSS LVHRPAVFPS FTFFFTLLLA MSSAQQLSAN FYASSCSNAL SIIKQGVVSA VQAEARMGAS LLRLHFHDCF GCDGSILLDD TPNFTGEKNA GPNGGSVRGY NVIDSIKAQL  ESACPGVVSC VDIVAVAARD SVVALGGPSW NVLLGRRDST TASASAANNN IPAPTFSLSQ LISSFSNKGF STREMVALSG AHTIGQARCT TFQTHIYNDA NINPTFASSL KAICPQSGGD 
NNLAPLDNTP TTFDNAYFVN LQGQKGVFHS DQELFNGGST DSIVNTYSSN PSTFASEFAN AMLKMSNLNP LTGSNGEIRK KCGSTN 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (extra sequence between exon 1 and 2)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGGCTA CCGGAGTCTA TTCTTCCTCA TTAGTTCATC GTCCGGCTGT CTTCCCATCA TTTACATTCT TCTTCACCCT TCTCCTCGCC ATGTCCTCCG CCCAGCAGCT CTCTGCAAAT  TTCTACGCTT CGTCGTGCTC GAACGCCCTT TCCATAATAA AGCAGGGGGT GGTGTCCGCC GTGCAGGCGG AGGCTCGGAT GGGAGCGTCC TTGCTTCGTC TCCATTTCCA TGATTGCTTC  GGTTGTGACG GATCAATTTT GTTGGATGAC ACGCCAAACT TCACCGGAGA GAAAAACGCG GGTCCAAATG GCGGATCGGT GAGAGGATAC AACGTGATTG ACTCCATTAA GGCTCAACTC  GAGAGCGCTT GTCCTGGTGT CGTATCTTGT GTTGACATTG TTGCGGTCGC CGCTCGAGAC TCTGTTGTTG CGCTTGGTGG CCCCAGTTGG AACGTTTTAC TAGGGAGAAG AGATTCCACC  ACTGCGAGTG CTAGCGCGGC TAACAATAAT ATTCCTGCAC CAACATTCAG TCTGAGTCAA CTCATCTCTT CTTTCTCCAA CAAAGGCTTT TCCACCCGCG AAATGGTTGC TCTATCAGGA  GCGCACACAA TAGGGCAAGC TAGGTGCACG ACGTTCCAGA CTCATATCTA CAATGACGCT AATATAAATC CCACATTTGC AAGCTCATTG AAAGCAATTT GTCCTCAAAG CGGGGGTGAC  AACAACCTTG CCCCACTCGA CAATACTCCA ACTACGTTTG ACAATGCTTA TTTTGTGAAC TTGCAAGGTC AAAAAGGAGT TTTCCATTCT GACCAGGAAC TCTTCAACGG AGGTTCCACG  GACTCCATTG TCAACACCTA CAGCTCCAAC CCATCTACCT TTGCTTCCGA ATTCGCAAAC GCTATGCTAA AAATGAGTAA TCTTAACCCT CTCACAGGCT CTAATGGCGA GATCAGGAAG 
AAGTGTGGGA GTACCAATTG A 

Retrieve as FASTA