Entry information : CcampPrx63(Cuscam_OOIL01000102.1_FGenesh147.1)
Entry ID 16141
Creation 2020-01-11 (Christophe Dunand)
Last sequence changes 2020-01-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-01-14 (Christophe Dunand)
Peroxidase information: CcampPrx63(Cuscam_OOIL01000102.1_FGenesh147.1)
Name CcampPrx63(Cuscam_OOIL01000102.1_FGenesh147.1)
Class Class III peroxidase    [Orthogroup: Prx018]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Cuscuta campestris    [TaxId: 132261 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CcampPrx63
start..stop
S start..stop
CcampPrx71 708 0 19..367 17..365
NtPrx08-1B 524 0 45..367 7..333
LsaPrx06 520 0 43..363 4..325
TcPrx17 518 0 52..360 13..321
Literature and cross-references CcampPrx63(Cuscam_OOIL01000102.1_FGenesh147.1)
Protein sequence: CcampPrx63(Cuscam_OOIL01000102.1_FGenesh147.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   367
PWM (Da):   %s   40513.6  
PI (pH):   %s   8.89
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDILNPINPA KRQSFPSLKP NKNQPDIPIT TKNQVSKKVG MSLTFILFLL SLAMAAAMEL RPGYYSKTCP KAENIVRNVI AKNMARDSRS TASVMRLQFH DCFVNGCDAS LLLDDTPSML  GEKLSLSNIN SLRSYEVIDE AKEEVERVCP GIVSCADILI MAARDATVLS GGPKWNVKLG RLDSLTASQQ DSDRIMPSPR ANSTYLIDLF SRFNLSVKDL VALSGSHSIG KGRCFSIVFR  LYNQSGSGKP DPTMEPKFRA NLHKLCPLGG DGNVTGDLDA TGVIFDNQYF KDLVLGRGFL NSDQTLFTFP QTRGYVRQFS EDQNEFFKAF VEGMIKMGDL QSGRPGEIRR NCRVLNSHPT 
VKVFESS 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from FGeneSH (short PS predicted)
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGATATTC TCAATCCAAT CAATCCTGCA AAACGCCAAT CATTCCCTTC ACTAAAGCCC AATAAGAATC AACCAGACAT TCCCATCACC ACCAAGAACC AAGTAAGCAA AAAAGTGGGA  ATGTCTCTTA CCTTTATCCT CTTCCTCTTA AGCTTGGCAA TGGCTGCAGC CATGGAGCTC CGACCAGGCT ACTACTCCAA GACATGCCCA AAAGCAGAGA ATATTGTCAG GAATGTTATA  GCCAAGAATA TGGCAAGAGA TTCCAGAAGC ACTGCCTCAG TCATGCGCCT GCAGTTCCAC GATTGCTTTG TTAATGGGTG TGATGCTTCT CTGTTGTTGG ATGACACTCC AAGCATGCTT  GGAGAGAAAC TTTCGTTGTC CAATATAAAC TCGCTAAGGT CGTACGAGGT TATTGATGAA GCTAAAGAAG AAGTTGAGAG AGTCTGTCCG GGAATTGTTT CTTGTGCTGA CATCTTGATC  ATGGCTGCAA GAGATGCTAC TGTCCTGAGT GGAGGGCCAA AGTGGAATGT GAAGTTAGGA AGGCTAGACA GCTTAACAGC AAGCCAACAA GATTCAGATA GAATCATGCC AAGCCCAAGG  GCAAACTCAA CTTACCTCAT TGATCTCTTC AGCAGATTCA ATCTCTCTGT GAAAGATCTA GTGGCACTTT CAGGTTCTCA TTCCATTGGT AAGGGAAGAT GCTTCTCTAT AGTTTTCCGG  CTATACAACC AATCAGGTTC AGGCAAGCCT GACCCAACCA TGGAACCAAA ATTTAGAGCT AATTTACATA AGCTATGCCC ACTTGGAGGT GATGGGAACG TAACAGGAGA CTTAGATGCA  ACAGGAGTGA TATTTGACAA CCAATATTTT AAGGACTTGG TCCTTGGGAG AGGATTTCTG AACTCAGACC AGACCCTCTT CACCTTCCCA CAAACCAGGG GTTACGTGAG GCAATTTAGT  GAAGACCAAA ATGAGTTCTT CAAGGCATTC GTTGAAGGGA TGATAAAAAT GGGCGACCTG CAATCAGGCC GTCCTGGAGA GATCAGAAGA AACTGCAGGG TGTTAAATAG CCATCCGACG 
GTAAAAGTGT TTGAATCATC CTGA 

Retrieve as FASTA