RedOxiBase: View Perox 16258

Entry information : ToriRboh10(PON84171.1/TorRBOH6)

Entry ID	16258
Creation	2020-03-20 (Baptiste Sarrette)
Last sequence changes	2020-03-22 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2020-05-10 (Christophe Dunand)

Peroxidase information: ToriRboh10(PON84171.1/TorRBOH6)

Name

ToriRboh10(PON84171.1/TorRBOH6)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh003]

Taxonomy

Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons

Organism

Trema orientalis [TaxId: 63057 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	ToriRboh10 start..stop	S start..stop
PandeRboh09	1488	0	5..776	1..772
ToriRboh09	1249	0	1..776	65..839
PandeRboh07	1244	0	1..776	65..839
JregRboh08	1203	0	3..776	31..803

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	442030..442198	169	N° 2	441730..441895	166	N° 3	441588..441636	49	N° 4	441366..441479	114
N° 5	440463..441269	807	N° 6	440199..440294	96	N° 7	439994..440109	116	N° 8	439805..439907	103
N° 9	439643..439734	92	N° 10	439402..439561	160	N° 11	439172..439312	141	N° 12	438549..438677	129
N° 13	438367..438445	79	N° 14	438166..438275	110
complement(join(438166..438275,438367..438445,438549..438677,439172..439312,4394 02..439561,439643..439734,439805..439907,439994..440109,440199..440294,440463..4 41269,441366..441479,441588..441636,441730..441895,442030..442198))

Literature and cross-references ToriRboh10(PON84171.1/TorRBOH6)

Protein sequence: ToriRboh10(PON84171.1/TorRBOH6)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	776
PWM (Da):	88463.08
PI (pH):	8.88

Sequence 1109
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MTGKMSSGASKGLTSLRFLDTTLSGKESDTWKPIEERFSKHAVDGRLCRDNFGACIGMVRESKDFAGELFDALARHRKISAENGITRDELRMFWEDMTNEDLESRLQIFFDMCDKNGDGKLSEEEVKVIVLSASANKLANFKQQAAAYAALIMEKLDPDHLGYIKMWQLETLLKGMVNSEENDDVLKETKSLTKSMIPRRYQTPLSKFISTTKEFIHENWKRIWVITFWLAINLGLFLWKYFQYKNRGAYQIMGQCVCFAKGAAETLKLNMALILFPVCRRILTKLRSSFLSNFVPFDDNINFHKLFAFAIAAMTSVHVLMHLACDFPRMISCPKEKFMNILGDDFDFKQPTYLDLIKSIPGVTGIIMILLMAFAFTLALNSLRRNVIKLPWPFNHLAGFNSFWYVHHLLVVVYVLLVIHGYFLFLTHDWTKKTTWMYIVVPVFLYATERTYSIFNESNHRVSVLKATIYKGNVLALRMSKPQGFEFKSGMYLFVKCPDISRFEWHPFSITSAPDDDYLSVHIRSLGDWTTALKNRFAACRPERTQSKSGNLIQTEKAAVSDDKQPQAGYPRILIKGPYGAPSQNFDEYDILLLIGLGIGATPFISILKDLLKKIELNDLEGSTGSSGSSKSHGKGPKRAYFYWATGEQGSFEWFKGVMDDIAEHDEHHIIEMHNHLTSVHGEGDARSALISMIQKLQHAKNGVDVVSESRIKTHFGRPNWQKVFSEMASRHESSRIGVFYCGNATLTQKLRKLCQEFSSNSSTRFEFHKENF

Retrieve as FASTA

Remarks

Short 5' end. Not found in upstream sequence

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGACCGGAAAAATGAGTTCTGGAGCTTCCAAAGGTCTCACGAGTCTTCGTTTTCTTGATACAACCCTCAGTGGGAAGGAAAGTGATACTTGGAAACCGATTGAGGAGAGGTTTAGTAAG
CATGCAGTAGATGGGAGACTCTGTAGGGACAATTTTGGTGCCTGCATAGGTAAAAAAATCTTGCTCATTAATCTCTTATATATATATACATACATATATTTTTTTATATGGATATGTGCA
TGTGTTAGTATGTTGTGTATGTGGATTGTGGAATTTGAGTCTTGGAAAAATGGGTTTATGTAGGAATGGTAAGGGAGTCAAAGGATTTTGCTGGAGAGCTGTTTGATGCTTTGGCTAGGC
ATAGAAAGATAAGTGCAGAAAACGGTATAACTCGAGATGAACTGAGAATGTTTTGGGAGGATATGACTAATGAAGACCTTGAATCAAGATTGCAGATCTTTTTTGACATGTGAGGATAAC
TAACAAGTCACACTTTTCTTGTTGTTTTGTTGCTTTTTTCTTGTGCTACAAATAAACTATGGGTACCTCAATTTGTTACTAGGTGTGACAAGAATGGAGATGGGAAGCTTTCAGAGGAAG
AAGTTAAGGAGGTAAGGCCAGAGGCCCACAAGTATGGTTAATCATTTTCTCTATTTGTTTAATTCTCTCTCTTTTCCTGTTAGTGTCTTCTGAAATTGTGTGTGTAAAAATTGTAAAAGG
TTATAGTTTTGAGTGCCTCGGCGAACAAGTTGGCAAATTTCAAACAGCAAGCTGCAGCATATGCAGCTCTGATCATGGAAAAGCTAGATCCTGACCATCTTGGTTATATAAAGGTGAATT
GTTGCTGATTTTGCCTTTTTCTATTTTCCTTATCTTTGTCTTCACCTTTTCTCCAGTTTCTCACTTTAAACTTTTCTAATTTTTCTCAGATGTGGCAACTTGAAACTCTACTCAAGGGAA
TGGTGAACTCCGAAGAGAATGACGACGTTTTAAAGGAAACCAAAAGTCTCACTAAATCCATGATTCCCAGAAGATACCAAACACCTTTGAGCAAGTTCATATCCACAACTAAGGAATTCA
TCCATGAAAATTGGAAGAGAATATGGGTTATCACTTTTTGGTTAGCCATCAACTTGGGCCTCTTTCTTTGGAAGTACTTTCAATATAAGAACAGAGGAGCTTACCAAATCATGGGCCAGT
GTGTCTGCTTTGCCAAAGGTGCTGCTGAGACTCTCAAGCTCAATATGGCTCTCATTCTCTTCCCAGTATGTAGGAGAATTCTCACAAAGCTCAGATCATCATTTCTCAGTAACTTTGTCC
CTTTTGATGACAACATCAACTTCCACAAGTTATTTGCATTTGCAATAGCAGCTATGACTTCTGTACATGTTTTGATGCATTTAGCTTGTGATTTTCCGAGAATGATTTCGTGCCCGAAAG
AGAAGTTTATGAACATTTTGGGAGACGATTTCGACTTCAAGCAGCCAACTTACCTGGACTTGATAAAAAGTATTCCAGGTGTGACCGGGATTATAATGATCCTTCTAATGGCTTTTGCCT
TCACTCTGGCGTTAAACTCACTCAGGAGAAATGTCATCAAGTTGCCATGGCCATTCAACCATTTGGCAGGGTTTAATTCTTTCTGGTATGTACATCATTTGCTGGTTGTGGTGTATGTAC
TCCTTGTCATACATGGCTACTTCCTATTTCTCACCCACGACTGGACCAAGAAGACGGTATGTATGCTATTTTTTTGTATTGAACATGTTCTAGTGAAACCCTACACTCAAAGAAAAGTCT
ACGATGTATCACTGTTGCTTAGAACAATATTTACCAGAGAAAGATACTAATTTCTTGGCTTAAAATGATGCTGACATTAAATTGAACTATATTTTTTTGTGTAGACATGGATGTATATAG
TGGTCCCTGTCTTTCTCTATGCAACTGAAAGGACTTATTCAATCTTCAACGAAAGCAATCACCGTGTCAGTGTTCTTAAGGTCAGTAGAAGCAGTGTTTTTTTTCAGTAAATAGTTTGGA
ATAGTCGAGAAACTTGAAGCGAAGTCATTATATTCTTTGAACGTTGCAGGCAACGATATACAAAGGTAATGTGCTAGCATTGCGCATGAGCAAACCTCAAGGATTCGAGTTCAAAAGTGG
AATGTATCTTTTTGTCAAGTGTCCAGATATATCTAGATTTGAATGGTATGAACCATATATTTAATGCATATGTGACTTTACGTAAAATTTATCTTGCCATGATCAAGTTTGGACACTGTT
ATTTGCTTCAGGCATCCTTTTTCCATCACTTCTGCACCAGATGATGACTACTTGAGTGTCCATATAAGGAGCTTAGGGGATTGGACCACAGCACTTAAAAACAGATTTGCACCGGTATAT
AACTTCATTATGCGTAAAATCATTTGTTTCCATAGCTTCAGCGTCCTTAAGTCGAAGAATGCAGGCATGTCGACCAGAAAGAACACAATCAAAGAGTGGAAACCTCATCCAGACGGAAAA
AGCAGCTGTCTCAGATGACAAACAGCCCCAAGCAGGGTGAGCAGAATCTGAGACAAGATTCTTCAGAGCTTTCACTCTTTGCTATCATATCAAACACTCTCCTCCTTCTGGTGTCAGGTA
TCCAAGAATCCTCATAAAGGGGCCATATGGAGCTCCATCACAGAATTTCGACGAGTATGACATTCTCTTGCTCATTGGTCTTGGAATTGGGGCAACTCCATTCATTAGCATTCTTAAAGA
TCTTTTGAAAAAAATTGAGCTAAATGACCTTGAATCTGTGAGTTAAGAGGCAAATCAATCAGATCTATCTTCTGTTTGAAATGTGTTAAACATGTGGTATTTACTTGGAAAGAGTGACAA
ATGCAGGGATCAACTGGCAGTAGTGGTTCATCCAAATCACATGGAAAAGGTCCTAAAAGAGCTTACTTTTACTGGGCAACAGGTGAACAAGGATCCTTCGAATGGTTTAAAGGTGTCATG
GATGACATCGCAGAGCACGACGAACATGTAGGTTTCGGATCTCAACTTGACACGTTTACTAATTTCTTAATGAATATTTCATAATAAAAAAAGTTCTTGGAAAGTAATGAAAAGGGATCA
TATTTGAAGGAATATGATATTTTTCTTTCTAGTGTTTATTAGAAGTTGTTGCTGGAATCAGAGATATTCCTTTCTAGCTGGCTTGCTTATTTTTTTTTAGCAATATAGGGATAGGAATCA
AAATTATGCGCATAAATCTTTTTTTGTCTGCTTAGATATATTTTTAACAGTTATTAAGTACATAAGAATAATTTTATAATTCATTTCAATGGAATCCTCACTTTTCTAATCAAGTAAAAC
CTACAAAAACTTTGTTCCCAATTGTAGTTGTAATAGTAAACGTATGAATTAATGGGAAAAGGAAGCTTTTTCCCTGTTCTCTTTCCTCAGCTATTTTCATAACTGAAGTAACTCAATTGG
TCATGACATTATGATGTTTTGGGGTCCCTGAATATTTGCAGCATATAATAGAAATGCACAACCACTTGACTAGTGTACATGGAGAAGGAGATGCAAGGTCTGCTCTTATTTCCATGATTC
AAAAGCTGCAACATGCTAAGAATGGGGTTGATGTTGTCTCAGAAAGCCGGGTATATGTATATCATTAAGTACAAACCAATATTAATTTACTCGTTATGAATTATGCATTATCATTATTAT
ATCTTATCTTTTTTGACATGTAAATTACAACAGATAAAAACTCATTTTGGAAGACCAAATTGGCAAAAAGTGTTTTCTGAGATGGCAAGTAGGCATGAATCTTCTCGGATAGGTATTGAA
TTATAAAATTACTATAAAGAACATAAAGAAAGATTCTTCTTGTTCTTTTGATTTCTCATTAGTGGTTGATTTTGCTATAACAGGTGTATTCTACTGTGGAAATGCTACACTCACCCAAAA
ACTGAGGAAGCTTTGCCAAGAATTCAGCTCAAATTCATCAACCCGTTTCGAATTTCACAAAGAGAACTTTTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA